mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 108 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5868966 = | 57 (0.970) | 4 (0.070) | 3/250 | NT | 7.8% | coding (397/783 nt) | PP_5143 | membrane protein |
| ? | NC_002947 | 5869013 = | 39 (0.680) | coding (350/783 nt) | PP_5143 | membrane protein | |||||
| * | ? | NC_002947 | 5833921 = | 70 (1.190) | 3 (0.050) | 3/246 | NT | 4.5% | coding (199/1491 nt) | PP_5113 | Zn‑dependent peptidase |
| ? | NC_002947 | 5833957 = | 62 (1.110) | coding (235/1491 nt) | PP_5113 | Zn‑dependent peptidase | |||||
| * | ? | NC_002947 | = 5799893 | 73 (1.240) | 3 (0.050) | 3/244 | NT | 4.1% | coding (1083/1098 nt) | aroB | 3‑dehydroquinate synthase |
| ? | NC_002947 | = 5799916 | 73 (1.310) | coding (1060/1098 nt) | aroB | 3‑dehydroquinate synthase | |||||
| * | ? | NC_002947 | = 5744269 | 64 (1.090) | 3 (0.050) | 3/250 | NT | 4.7% | coding (1596/2451 nt) | glgP | glycogen phosphorylase |
| ? | NC_002947 | = 5744300 | 60 (1.050) | coding (1565/2451 nt) | glgP | glycogen phosphorylase | |||||
| * | ? | NC_002947 | = 5662415 | 66 (1.120) | 3 (0.050) | 3/248 | NT | 4.2% | coding (207/393 nt) | PP_4969 | hypothetical protein |
| ? | NC_002947 | = 5662447 | 75 (1.330) | coding (239/393 nt) | PP_4969 | hypothetical protein | |||||
| * | ? | NC_002947 | 5329487 = | 86 (1.460) | 4 (0.070) | 4/246 | NT | 4.8% | coding (120/345 nt) | PP_4690 | Rieske 2Fe‑2S family protein |
| ? | NC_002947 | 5329522 = | 77 (1.370) | coding (155/345 nt) | PP_4690 | Rieske 2Fe‑2S family protein | |||||
| * | ? | NC_002947 | 5279838 = | 50 (0.850) | 3 (0.050) | 3/248 | NT | 5.8% | coding (57/1086 nt) | trmA | tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA |
| ? | NC_002947 | 5279876 = | 50 (0.880) | coding (95/1086 nt) | trmA | tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA | |||||
| * | ? | NC_002947 | = 5094906 | 69 (1.170) | 3 (0.050) | 3/246 | NT | 4.6% | coding (300/699 nt) | hisM | histidine/lysine/arginine/ornithine ABC transporter permease |
| ? | NC_002947 | = 5094955 | 60 (1.070) | coding (251/699 nt) | hisM | histidine/lysine/arginine/ornithine ABC transporter permease | |||||
| * | ? | NC_002947 | 4957290 = | 63 (1.070) | 3 (0.050) | 3/250 | NT | 4.9% | coding (228/792 nt) | fliH | flagellar assembly protein FliH |
| ? | NC_002947 | 4957335 = | 55 (0.960) | coding (183/792 nt) | fliH | flagellar assembly protein FliH | |||||
| * | ? | NC_002947 | = 4863136 | 63 (1.070) | 3 (0.050) | 3/242 | NT | 4.6% | coding (2737/3489 nt) | smc | chromosome partition protein Smc |
| ? | NC_002947 | = 4863209 | 66 (1.200) | coding (2664/3489 nt) | smc | chromosome partition protein Smc | |||||