New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 558379328 (1.090)5 (0.200) 3/276 3.4 16.0% coding (1939/2259 nt) parC DNA topoisomerase IV subunit A
?NC_002947 = 5583844 26 (1.060)coding (1888/2259 nt) parC DNA topoisomerase IV subunit A
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCTTGTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5583697‑5583793
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgctcAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGATCGCGAGCAGGACTGGTTGGCGGCGGTGACCACCGAAGGCCGCCTGCTGGTGTTCAAGGTCAGCGACTTGCCACAGCTGGGTAAAGGCAAGGGCAA  <  NC_002947/5583844‑5583702
                                                                                                                                                                                                                                                
TCTTGTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGATCG                                                                                               >  6:135700/1‑147
TCTTGTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGATCG                                                                                               >  6:98806/1‑147
      TGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGATCGCGAGCAG                                                                                        <  5:135700/148‑1
      TGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGATCGCGAGCAG                                                                                        <  5:98806/148‑1
           TTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGATCGCGAGCAGGACTG                                                                                   <  2:128432/148‑1
                                                                                              CTCAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGCTCGCGAGCAGGACTGGTTGGCGGCGGTGCCCACCGAAGGCCGCCTGCTGGTGTTCAAGGTCAGCGACTTGCCCCAGCTGGGTAAAGGCAAGGGCAA  >  7:123951/1‑146
                                                                                              CTCAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGATCGCGAGCAGGACTGGTTGGCGGCGGTGACCACCGAAGGCCGCCTGCTGGTGTTCAAGGTCAGCGACTTGCCACAGCTGGGTAAAGGCAAGGGCAA  >  5:22236/1‑146
                                                                                                                                                                                                                                                
TCTTGTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5583697‑5583793
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgctcAGCTTGCCCAACGGGGCCAAGGTCATGACCCCGCGCCCGGTGGCCGATCGCGAGCAGGACTGGTTGGCGGCGGTGACCACCGAAGGCCGCCTGCTGGTGTTCAAGGTCAGCGACTTGCCACAGCTGGGTAAAGGCAAGGGCAA  <  NC_002947/5583844‑5583702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.