New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5583793	28 (1.090)	5 (0.200)	3/276	3.4	16.0%	coding (1939/2259 nt)	parC	DNA topoisomerase IV subunit A
	?	NC_002947	= 5583844	26 (1.060)					coding (1888/2259 nt)	parC	DNA topoisomerase IV subunit A
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CAAATTCTTCACGGCTGGCCACCCGGTCACCCGGCACGCCAATGATCTTGTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCGGCCTTGTTCTTGGCCTGCAGGTCTTCACCCTTGACCACGAAGCCGTAACCGGCATCCGAAGCCACCACGTACAGCGCAT  >  NC_002947/5583652‑5583939                                                                                                                                              |                                                                                                                                                   cAAATTCTTCACGGCTGGCCACCCGGTCACCCGGCACGCCAATGATCTTGTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGCCATTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGATCGCGATc                                                                                                                                              >  7:65653/1‑148 (MQ=255) cAAATTCTTCACGGCTGGCCACCCGGTCACCCGGCACGCCAATGATCTTGTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATc                                                                                                                                              <  4:103870/148‑1 (MQ=255)                   ccACCCGGTCACCCGGCACGCCAATGATCTTGTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCggg                                                                                                                              <  3:106803/146‑1 (MQ=255)                             aCCCGGCACGCCAATGATCTTGTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTg                                                                                                                  >  1:17628/1‑148 (MQ=255)                              cccGGCACGCCAATGATCTTGTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTgg                                                                                                                 <  1:94299/148‑1 (MQ=255)                                  gCACGCCAATGATCTTCTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCACGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGTcccc                                                                                                             >  2:54681/1‑148 (MQ=255)                                       ccAATGATCTTGTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTgg                                                                                                        <  6:109604/148‑1 (MQ=255)                                        cAATGATCTTGTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTgg                                                                                                        >  6:117223/1‑147 (MQ=255)                                                   ttgCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAg                                                                                              <  5:22236/146‑1 (MQ=255)                                                   ttgCCCTTGCCTTTACCCAGCTGGGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGGCACCGCCGCCAACCAGTCCTGCTCGCGAGCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAg                                                                                              <  7:123951/146‑1 (MQ=255)                                                       ccTTGCCCTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGc                                                                                         <  8:72288/147‑1 (MQ=255)                                                              tttACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGCCCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCg                                                                                 >  8:57810/1‑148 (MQ=255)                                                              tttACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCg                                                                                 <  5:63638/148‑1 (MQ=255)                                                                  cccAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGGTGGGCAAGCTGAGCAGGCCTTTGCCGGcc                                                                              <  4:3738/147‑1 (MQ=255)                                                                    cAGCTGTGGCAAGTCGCTGACCTTGAACACCATCAGGCGGCCTTCTGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCGGCCTTg                                                                           <  3:63594/148‑1 (MQ=255)                                                                     aGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCGGCCTTGt                                                                          >  5:431/1‑148 (MQ=255)                                                                       cTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCGGCCTTGTTc                                                                        >  8:45379/1‑148 (MQ=255)                                                                            gCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCGGCCTTGTTCTTGGc                                                                   >  1:43872/1‑148 (MQ=255)                                                                                  cGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCGGCCTTGTTCTTGGCCTGCAg                                                             <  8:34592/148‑1 (MQ=255)                                                                                    cTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCGGCCTTGTTCTTGGCCTGCAGGt                                                           <  3:22573/148‑1 (MQ=255)                                                                                     tGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCGGCCTTGTTCTTGGCCTGCAGGTc                                                          >  1:31780/1‑148 (MQ=255)                                                                                     tGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCGGCCTTGTTCTTGGCCTGCAGGTc                                                          <  8:24197/148‑1 (MQ=255)                                                                                                              ttCGGTGGGCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCGGCCTTGTTCTTGGCCTGCAGGTCTTCACCCTTGACCACGAAGCCGTaa                                 <  5:15605/148‑1 (MQ=255)                                                                                                                  gtggtCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCGGCCTTGTTCTTGGCCTGCAGGTCTTCACCCTTGACCACGAAGCCGTAACCg                              >  8:82833/1‑147 (MQ=255)                                                                                                                                cAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCGGCCTTGTTCTTGGCCTGCAGGTCTTCACCCTTGACCACGAAGCCGTAACCGGCATCCGAAGccacc               >  3:11491/1‑148 (MQ=255)                                                                                                                                  aCCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCGGCCTTGTTCTTGGCCTGCAGGTCTTCACCCTTGACCACGAAGCCGTAACCGGCATCCGAAGCcaccac             <  7:45379/148‑1 (MQ=255)                                                                                                                                   ccAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCGGCCTTGTTCTTGGCCTGCAGGTCTTCACCCTTGACCACGAAGCCGTAACCGGCATCCGAAGCcaccac             >  8:113179/1‑147 (MQ=255)                                                                                                                                             tCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCGGCCTTGTTCTTGGCCTGCAGGTCTTCACCCTTGACCACGAAGCCGTAACCGGCATCCGAAGCCACCACGTACAGCGCAt  >  3:111543/1‑148 (MQ=255)                                                                                                                                              |                                                                                                                                                   CAAATTCTTCACGGCTGGCCACCCGGTCACCCGGCACGCCAATGATCTTGTTGCCCTTGCCTTTACCCAGCTGTGGCAAGTCGCTGACCTTGAACACCAGCAGGCGGCCTTCGGTGGTCACCGCCGCCAACCAGTCCTGCTCGCGATCGGCCACCGGGCGCGGGGTCATGACCTTGGCCCCGTTGGGCAAGCTGAGCAGGCCTTTGCCGGCCTTGTTCTTGGCCTGCAGGTCTTCACCCTTGACCACGAAGCCGTAACCGGCATCCGAAGCCACCACGTACAGCGCAT  >  NC_002947/5583652‑5583939

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.