| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 316761 = | 53 (1.030) | 3 (0.060) | 3/246 | NT | 5.9% | coding (1170/1407 nt) | dctD‑I | C4‑dicarboxylate transport transcriptional regulator |
| ? | NC_002947 | 316840 = | 45 (0.920) | coding (1091/1407 nt) | dctD‑I | C4‑dicarboxylate transport transcriptional regulator | |||||
ATGCTGCCAGCCAACGTCATGGCCTGTCGCCGCATGCGCTGCAACCCGCGCAACGCGCCCTGCTGCTGCGTCATGACTGGCCAGGCAACGTCCGCGAGCTACAGAACGCCGCCGAGCGTTTCGCCCTTGGCCTGGAGCTGGCACTGGATGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/316915‑316761‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccagTCATGACGCAGCAGCAGGGCGCGTTGCGCGGGTTGCAGCGCATGCGGCGACAGGCCATGACGTTGGCTGGCAGCATCGGCGAAATGCTGGAACAACACCAATATGTCGTCGCCGCGTTCACGCAGTGGCGGAATACGCAGCG > NC_002947/316840‑316981 ATGCTGCCAGCCAACGTCATGGCCTGTCGCCGCATGCGCTGCAACCCGCGCAACGCGCCCTGCTGCTGCGTCATGACTTGCCAGGCAACGTCCGCGAGCTACAGAACGCCGCCGAGCGTTTCGCCCTTGGCCTGGAGCTGGCACTGGAT < 8:104327/149‑1ATGCTGCCAGCCAACGTCATGGCCTGTCGCCGCATGCGCTGCAACCCGCGCAACGCGCCCTGCTGCTGCGTCATGACTGGCCAGGCAACGTCCGCGAGCTACAGAACGCCGCCGAGCGTTTCGCCCTTGGCCTGGAGCTGGCACTGGAT < 7:155450/149‑1 TGCCAGCCAACGTCATGGCCTGTCGCCGCATGCGCTGCAACCCGCGCAACGCGCCCTGCTGCTGCGTCATGACTGGCCAGGCAACGTCCGCGAGCTACAGAACGCCGCCGAGCGTTTCGCCCTTGGCCTGGAGCTGGCACTGGATGGC > 3:114703/1‑148 CATGACTGGCCAGGCAACGTCCGCGAGCTACAGAACGCCGCCGAGCGTTTCGCCCTTGGCCTGGAGCTGGCACTGGATGGCCAGTCATGACGCAGCAGCAGGGCGCGTTGCGCGGGTTGCAGCGCATGCGGCGACAGGCCATGACGTTG > 3:221761/1‑149 TGGCCAGGCAACGTCCGCGAGCTACAGAACGCCGCCGAGCGTTTCGCCCTTGGCCTGGAGCTGGCACTGGATGGCCAGTCATGACGCAGCAGCAGGGCGCGTTGCGCGGGTTGCAGCGCATGCGGCGACAGGCCATGACGTTGGCTGG > 5:124424/1‑148 GTCCGCGAGCTACAGAACGCCGCCGAGCGTTTCGCCCTTGGCCTGGAGCTGGCACTGGATGGCCAGTCATGACGCAGCAGCAGGGCGCGTTGCGCGGGTTGCAGCGCATGCGGCGACAGGCCATGACGTTGGCTGGCAGCATCGGCGAA < 4:221761/149‑1 TGGACAGTCATGACGCAGCAGCAGGGCGCGTTGCGCGGGTTGCAGCGCATGCGGCGACAGGCCATGACGTTGGCTGGCAGCATCGGCGAAATGCTGGAACAACACCAATATGTCGTCGCCGCGTTCACGCAGTGGCGGAATACGCAGCG > 6:281807/1‑149 ATGCTGCCAGCCAACGTCATGGCCTGTCGCCGCATGCGCTGCAACCCGCGCAACGCGCCCTGCTGCTGCGTCATGACTGGCCAGGCAACGTCCGCGAGCTACAGAACGCCGCCGAGCGTTTCGCCCTTGGCCTGGAGCTGGCACTGGATGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/316915‑316761‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccagTCATGACGCAGCAGCAGGGCGCGTTGCGCGGGTTGCAGCGCATGCGGCGACAGGCCATGACGTTGGCTGGCAGCATCGGCGAAATGCTGGAACAACACCAATATGTCGTCGCCGCGTTCACGCAGTGGCGGAATACGCAGCG > NC_002947/316840‑316981 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |