New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 404617 | 49 (0.950) | 3 (0.060) | 3/246 | NT | 6.0% | coding (1440/2691 nt) | PP_0337 | sensory box protein |
? | NC_002947 | = 404657 | 47 (0.960) | coding (1400/2691 nt) | PP_0337 | sensory box protein |
CAAACGCCTGGCCAGGCTGATCAGCAGCTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/404464‑404617 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacgccTGGCTTACACCGACAACCTCACCAACCTGGGCAACCGCCCGGCGTTCATCCGCAGCCTGGACGAACGCTTCGCCCGCGATGGCGAAAGCTCGATGTGCCTGCTGCTGGTGGACATCGACAACTTCAAGCGCATCAACGACAGC < NC_002947/404657‑404515 CAAACGCCTGGCCAGGCTGATCAGCAGCTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCAATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATG > 5:246463/1‑148 GCCTGGCCAGGCTGATCAGCAGCTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCC > 3:238240/1‑149 CTGGCCAGGCTGATCAGCAGCTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAA < 1:220165/143‑1 CTGGCCAGGCTCATCAGCAGCTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAA > 2:220165/1‑143 TCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCTGGCTTACACCGACAACCTCACCAACCTGGGCAACCGCCCGGCGTTCAT < 7:41276/148‑1 CTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCTGGCTTACACCGACAACCTCACCAACCTGGGCAACCGCCCGGCGTTC > 7:135761/1‑135 CTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCTGGCTTACACCGACAACCTCACCAACCTGGGCAACCGCCCGGCGTTC < 8:135761/135‑1 AACGCCTGGCTTACACCGACAACCTCACCAACCTGGGCAACCGCCCGGCGTTCATCCGCAGCCTGGACGAACGCTTCGCCCGCGATGGCGAAAGCTCGATGTGCCTGCTGCTGGTGGACATCGACAACTTCAAGCGCATCAACGACAGC > 6:246463/1‑149 CAAACGCCTGGCCAGGCTGATCAGCAGCTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/404464‑404617 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacgccTGGCTTACACCGACAACCTCACCAACCTGGGCAACCGCCCGGCGTTCATCCGCAGCCTGGACGAACGCTTCGCCCGCGATGGCGAAAGCTCGATGTGCCTGCTGCTGGTGGACATCGACAACTTCAAGCGCATCAACGACAGC < NC_002947/404657‑404515 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |