New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 40461749 (0.950)3 (0.060) 3/246 NT 6.0% coding (1440/2691 nt) PP_0337 sensory box protein
?NC_002947 = 404657 47 (0.960)coding (1400/2691 nt) PP_0337 sensory box protein

GCCTGGCCAGGCTGATCAGCAGCTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGTCAGCTCACGGTTGTCACCGTACACCTTGGAAATCGAC  >  NC_002947/404469‑404761
                                                                                                                                                    |                                                                                                                                                
gCCTGGCCAGGCTGATCAGCAGCTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCC                                                                                                                                                  >  3:238240‑M1/1‑149 (MQ=255)
 ccaggCCAGGCTGATCAGCAGCTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCg                                                                                                                                                 <  6:96270/146‑1 (MQ=255)
              aTCAGCAGCTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGccc                                                                                                                                      <  6:127346/147‑1 (MQ=255)
                  gcagcTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTg                                                                                                                                <  4:238240/149‑1 (MQ=255)
                     gcTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTg                                                                                                                             <  2:233381/149‑1 (MQ=255)
                      cTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTg                                                                                                                                <  7:185881/145‑1 (MQ=255)
                      cTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTg                                                                                                                                >  8:185881/1‑145 (MQ=255)
                            gCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGt                                                                                                                      >  5:208466/1‑149 (MQ=255)
                              cGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAATGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCg                                                                                                                    >  4:22445/1‑149 (MQ=255)
                               ggTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCgg                                                                                                                   >  4:301612/1‑149 (MQ=255)
                                gccTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGgt                                                                                                                  <  5:287255/147‑1 (MQ=255)
                                gTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAATGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGgt                                                                                                                  <  3:22445/149‑1 (MQ=255)
                                     gtggCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAg                                                                                                             >  7:240398/1‑149 (MQ=255)
                                              gCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAggcgtt                                                                                                    >  6:246463‑M2/1‑143 (MQ=255)
                                                  tCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCtggcttacaccgacaacctcaccaacctgggcaaccgcccggcgttcat                                                                                                 <  7:41276‑M1/148‑50 (MQ=255)
                                                  tCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGAt                                                                                                >  4:299231/1‑149 (MQ=255)
                                                            gcTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTgg                                                                                      >  6:216237/1‑149 (MQ=255)
                                                             cTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCtggcttacaccgacaacctcaccaacctgggcaaccgcccggcgttc                                                                                                   >  7:135761‑M1/1‑88 (MQ=255)
                                                             cTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCtggcttacaccgacaacctcaccaacctgggcaaccgcccggcgttc                                                                                                   <  8:135761‑M1/135‑48 (MQ=255)
                                                             cTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTggg                                                                                     <  5:153709/149‑1 (MQ=255)
                                                              ttGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGAt                                                                                                >  2:280087/1‑137 (MQ=255)
                                                                gAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGc                                                                                    >  7:31363/1‑147 (MQ=255)
                                                                gAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGc                                                                                    <  8:240398/147‑1 (MQ=255)
                                                                gAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGGTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGcc                                                                                   <  7:78216/148‑1 (MQ=255)
                                                                             tCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGGTTGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTggg                                                                      <  8:75036/148‑1 (MQ=255)
                                                                                accaGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGAc                                                                  >  5:269121/1‑149 (MQ=255)
                                                                                      agcagGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTc                                                            <  5:216237/149‑1 (MQ=255)
                                                                                        cagGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGt                                                          <  6:208466/149‑1 (MQ=255)
                                                                                         gtggacaGCGAGCTTTCGCCATCGCGGGCGAAGCGGTCGTCCAGGCGGCGTATGAACGCCGGGCGGTTGCCCAGGCTGGTGAGCTTGTCGGTGTAAGCCACGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCg                                                           <  8:165369/143‑1 (MQ=255)
                                                                                            cacaTCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCTATGCGTTGCTGGGCCAGCTAGGTATGTGTGACGTCTTCGTAGAt                                                      >  6:65407/1‑149 (MQ=255)
                                                                                            cacaTCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGAt                                                      <  3:301612/149‑1 (MQ=255)
                                                                                              caTCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGc                                                    <  6:269121/149‑1 (MQ=255)
                                                                                              caTCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGc                                                    <  4:201215/149‑1 (MQ=255)
                                                                                               aTCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGcc                                                   >  3:39287/1‑149 (MQ=255)
                                                                                               aTCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGcc                                                   >  6:73155/1‑149 (MQ=255)
                                                                                                tCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGcc                                                   >  8:80048/1‑148 (MQ=255)
                                                                                                  gAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGTCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGAt                                                >  1:49216/1‑149 (MQ=255)
                                                                                                      tttCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAg                                            >  6:155688/1‑149 (MQ=255)
                                                                                                      tttCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAg                                            <  5:73155/149‑1 (MQ=255)
                                                                                                            cATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGt                                       >  8:211905/1‑148 (MQ=255)
                                                                                                                gcgGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGTCAGCt                                  >  6:256115/1‑149 (MQ=255)
                                                                                                                  gggCGAAGCGTTCGTCCAGGGTGCGGATGTACGCGGGGCGGTTGCCCATGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGAAGTCTTCGTAGATGCCGATGTAGTGGGTCAGCTCa                                <  7:159942/149‑1 (MQ=255)
                                                                                                                    gCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGTCAGCTCACg                              <  8:31363/149‑1 (MQ=255)
                                                                                                                    gCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGTCAGCTCACg                              >  5:98044/1‑149 (MQ=255)
                                                                                                                       aaGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATTTAGTGGGTCAGCTCACGGtt                           <  6:98044/149‑1 (MQ=255)
                                                                                                                           gTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGTCAGCTCACGGTTGTCa                       <  5:155688/149‑1 (MQ=255)
                                                                                                                               gTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGTc                                      <  7:222449/130‑1 (MQ=255)
                                                                                                                                tCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGTCAGCTCACGGTTGTCACCGTa                  <  5:256115/149‑1 (MQ=255)
                                                                                                                                  cAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGATGTAAGCCAGGCGTTCGAAGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGTCAGCTCACGGTTGTCACCGTaca                >  1:243817/1‑149 (MQ=255)
                                                                                                                                         cGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGTCAGCTCACGGTTGTCACCGTACACCTTgg          >  6:297327/1‑148 (MQ=255)
                                                                                                                                         cGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGTCAGCTCACGGTTGTCACCGTACACCTTg           <  4:39287/147‑1 (MQ=255)
                                                                                                                                          ggATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCt                                                              >  4:222410/1‑95 (MQ=255)
                                                                                                                                          ggATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCt                                                              <  3:222410/95‑1 (MQ=255)
                                                                                                                                            aTGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAggcgttcatccgcagcctggacgaacgcttcgcccgcgatggcgaaagctcgatgtgcctgctgctggtggacatcgacaacttcaagcgcatcaacga       <  7:41276‑M2/148‑100 (MQ=255)
                                                                                                                                            aTGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGTCAGCTCACGGTTGTCACCGTACACCTTGGAAAt      >  1:108607/1‑149 (MQ=255)
                                                                                                                                            aTGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGTCAGCTCACGGTTGTCACCGTACACCTTGGAAAt      <  2:108607/149‑1 (MQ=255)
                                                                                                                                              gAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAggcgttcatccgcagcctggacgaacgcttcgcccgcgatggcgaaagctcgatgtgcctgctgctggtggacatcgacaacttcaag                  >  7:135761‑M2/1‑47 (MQ=255)
                                                                                                                                              gAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAggcgttcatccgcagcctggacgaacgcttcgcccgcgatggcgaaagctcgatgtgcctgctgctggtggacatcgacaacttcaag                  <  8:135761‑M2/135‑89 (MQ=255)
                                                                                                                                               aaCGCCtggcttacaccgacaacctcaccaacctgggcaaccgcccggcgttcatccgcagcctggacgaacgcttcgcccgcgatggcgaaagctcgatgtgcctgctgctggtggacatcgacaacttcaagcgcatcaacgacagc   >  6:246463‑M1/1‑6 (MQ=255)
                                                                                                                                                aCGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGTCAGCTCACGGTTGTCACCGTACACCTTGGAAATCGAc  <  3:299231/149‑1 (MQ=255)
                                                                                                                                                    cGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGTCAGTTCACGGTTGTCAcc                     <  2:33749/126‑1 (MQ=255)
                                                                                                                                                    cGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGTCAGTTCACGGTTGTCAcc                     >  1:33749/1‑126 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
GCCTGGCCAGGCTGATCAGCAGCTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCGGGCGGTTGCCCAGGTTGGTGAGGTTGTCGGTGTAAGCCAGGCGTTCGATGCGTTGCTGGGCCAGCTTGGTCTGGGTGACGTCTTCGTAGATGCCGATGTAGTGGGTCAGCTCACGGTTGTCACCGTACACCTTGGAAATCGAC  >  NC_002947/404469‑404761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.