New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 673259 = | 43 (0.830) | 4 (0.080) | 4/248 | NT | 7.6% | coding (261/777 nt) | PP_0574 | LuxR family transcriptional regulator |
? | NC_002947 | 673325 = | 56 (1.140) | coding (195/777 nt) | PP_0574 | LuxR family transcriptional regulator |
CCCTCTCAACCGACGAAGCCATCGAGCACTATGTGGCAGACCCGACCATCGGCTTGCTCATCTGTGACCTGCACATGCCCGATCGGGATGGCATCGAGCTGGTGCGCGCCTTGAAGGAAATCAACGGCAGCCAGCGCACGTTCGAAGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/673410‑673259 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatcCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGA > NC_002947/673325‑673440 CCCTCTCAACCGACGAAGCCATCGAGCACTATGTGGCAGACCCGACCATCGGCTTGCTCATCTGTGACCTGCACATGCCCGATCGGGATGGCATCGAGCTGGTGCGCGCCTTGAAGGAAATCAACGGCAGCCAGCGCACGTTCGAAGCC < 7:6471/149‑1 TCAACCGACGAAGCCATCGAGCACTATGTGGCAGACCCGACCATCGGCTTGCTCATCTGTGACCTGCACATGCCCGATCGGGATGGCATCGAGCTGGTGCGCGCCTTGAAGGAAATCAACGGCAGCCAGCGCACGTTCGAAGCCATC < 4:132376/147‑1 AGACCCGACCATCGGCTTGCTCATCTGTGAGCTGCACATGCCCGATCGGGATGGCATCGAGCTGGTGCGCGCCTTGAAGGAAATCAACGGCAGCCAGCGCACGTTCGAAGCCAT > 1:26594/1‑114 AGACCCGACCATCGGCTTGCTCATCTGTGACCTGCACATGCCCGATCGGGATGGCATCGAGCTGGTGCGCGCCTTGAAGGAAATCAACGGCAGCCAGCGCACGTTCGAAGCCAT < 2:26594/114‑1 GGATGGCATCGAGCTGGTGCGCGCCTTGAAGGAAATCAACGGCAGCCAGCGCACGTTCGAAGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTT > 3:284297/1‑146 GATGGCATCGAGCTGGTGCGCGCCTTGAAGGAAATCAACGGCAGCCAGCGCACGTTCGAAGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGA > 6:248313/1‑147 GCCTTGAAGGAAATCAACGGCAGCCAGCGCACGTTCGAAGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGC < 5:248313/149‑1 ATCAACGGCAGCCAGCGCACGTTCGAAGCCATCCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGA < 4:284297/149‑1 CCCTCTCAACCGACGAAGCCATCGAGCACTATGTGGCAGACCCGACCATCGGCTTGCTCATCTGTGACCTGCACATGCCCGATCGGGATGGCATCGAGCTGGTGCGCGCCTTGAAGGAAATCAACGGCAGCCAGCGCACGTTCGAAGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/673410‑673259 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatcCCGATCGGGCATGTGCAGGTCACAGATGAGCAAGCCGATGGTCGGGTCTGCCACATAGTGCTCGATGGCTTCGTCGGTTGAGAGGGCTGTAACGCAGGCATAGCCCTTGGTTTCGA > NC_002947/673325‑673440 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |