| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 683421 = | 44 (0.850) | 4 (0.080) | 3/250 | NT | 9.6% | intergenic (‑149/+19) | PP_0584/PP_0585 | methyl‑accepting chemotaxis transducer/MerR family metal‑sensitive transcriptional regulator |
| ? | NC_002947 | 683473 = | 33 (0.660) | coding (378/411 nt) | PP_0585 | MerR family metal‑sensitive transcriptional regulator | |||||
GCGCATCGAGGAGCTGGTGAGCCTGCGCGACACCCTCGGCGAGCTGGTTTCGCACTGTCAGGGTGACGACCGCCCGGACTGCCCGATCCTCAAAGACCTGGCCAATGGCGCTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGCCTTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/683572‑683421‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggcCAGGTCTTTGAGGATCGGGCAGTCCGGGCGGTCGTCACCCTGACAGTGCGAAACCAGCTCGCCGAGGGTGTCGCGCAGGCTCACCAGCTCCTCGATGCGCCGGTTCAGTTCATCGATGTGGTGCATGGCCAGCGCCTT > NC_002947/683473‑683610 GCGCATCGAGGAGCTGGTGAGCCTGCGCGACACCCTCGGCGAGCTGGTTTCGCACTGTCAGGGTGACGACCGCCCGGACTGCCCGATCCTCAAAGACCTGGCCAATGGCGCTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGCCTTT < 5:198619/149‑1 GAGGAGCTGGTGAGCCTGCGCGACACCCTCGGCGAGCTGGTTTCGCACTGTCAGGGTGACGACCGCCCGGACTGCCCGATCCTCAAAGACCTGGCCAATGGCGCTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGCCTTT > 3:178324/1‑142 GAGGAGCTGGTGAGCCTGCGCGACACCCTCGGCGAGCTGGTTTCGCACTGTCAGGGTGACGACCGCCCGGACTGCCCGATCCTCAAAGACCTGGCCAATGGCGCTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGCCTTT < 4:178324/142‑1 CTGCGCGACACCCTCGGCGAGCTGGTTTCGCACTGTCAGGGTGACGACCGCCCGGACTGCCCGATCCTCAAAGACCTGGCCAATGGCGCTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGCCTTT > 1:70394/1‑127 CTGCGCGACACCCTCGGCGAGCTGGTTTCGCACTGTCAGGGTGACGACCGCCCGGACTGCCCGATCCTCAAAGACCTGGCCAATGGCGCTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGCCTTT < 2:70394/127‑1 TGGCCAATGGCGCTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGCCTTTGGCCAGGTCTTTGAGGATCGGGCAGTCCGGGCGGTCGTCACCCTGACAGTGCGAAACCAGCTCGCCGAGGGTGTCGCGCAGGCTCACCAGCTCCTCGA > 8:271130/1‑149 TGGCCAATGGCGCTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGCCTTTGGCCAGGTCTTTGAGGATCGGGCAGTCCGGGCGGTCGTCACCCTGACAGTGCGAAA < 5:44134/107‑1 TGGCCAATGGCGCTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGCCTTTGGCCAGGTCTTTGAGGATCGGGCAGTCCGGGCGGTCGTCACCCTGACAGTGCGAAA > 6:44134/1‑107 CTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGCCTTTGGCCAGGTCTTTGAGGATCGGGCAGTCCGGGCGGTCGTCACCCTGACAGTGCGAAACCAGCTCGCCGAGGGTGTCGCGCAGGCTCACCAGCTCCTCGATGCGCCGGTTCA < 7:271130/149‑1 CCAGGTCTTTGAGGATCGGGCAGTCCGGGCGGTCGTCACCCTGACAGTGCGAAACCAGCTCGCCGAGGGTGTCGCGCAGGCTCACCAGCTCCTCGATGCGCCGGTTCAGTTCATCGATGTGGTGCATGGCCAGCGCCTT < 7:31407/139‑1 CCAGGTCTTTGAGGATCGGGCAGTCCGGGCGGTCGTCACCCTGACAGTGCGAAACCAGCTCGCCGAGGGTGTCGCGCAGGCTCACCAGCTCCTCGATGCGCCGGTTCAGTTCATCGATGTGGTGCATGGCCAGCGCCTT > 8:31407/1‑139 GCGCATCGAGGAGCTGGTGAGCCTGCGCGACACCCTCGGCGAGCTGGTTTCGCACTGTCAGGGTGACGACCGCCCGGACTGCCCGATCCTCAAAGACCTGGCCAATGGCGCTGCAGGTAGCTGCTGTCACTGAGCTGCCACGCGCCTTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/683572‑683421‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggcCAGGTCTTTGAGGATCGGGCAGTCCGGGCGGTCGTCACCCTGACAGTGCGAAACCAGCTCGCCGAGGGTGTCGCGCAGGCTCACCAGCTCCTCGATGCGCCGGTTCAGTTCATCGATGTGGTGCATGGCCAGCGCCTT > NC_002947/683473‑683610 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |