New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	693811 =	39 (0.760)	4 (0.080)	4/246	NT	10.1%	coding (231/918 nt)	PP_0595	LysR family transcriptional regulator
	?	NC_002947	693892 =	34 (0.700)					coding (150/918 nt)	PP_0595	LysR family transcriptional regulator

AGTGCGGTGGCTTCTCGGCTGCCGAAAACGTACTGGGCATTGGTCGCTCGGCCATCAGCCAGCAGATGAACGACCTCGAGCAACGCCTCGGCCTGCGCCTGTGTCAGCGCGGCCGCGCCGGTTTCTCGCTGACGGAGGAAGGCCGCGAGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/693962‑693811 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaggtcGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGCCGAGAAGCCACCGCACTCGACGACGCTGCGATAGATCTTCAGCAGGCGGATGTCGAAATCGCTGACTTGGGCGAGTGGATCGGGGCGTC  >  NC_002947/693892‑694034                                                                                                                                                                                                                                                                                                         AGTGCGGTGGCTTCTCGGCTGCCGAAAACGTACTGGGCATTGGTCGCTCGGCCATCAGCCAGCAGATGAACGACCTCGAGCAACGCCTCGGCCTGCGCCTGTGTCAGCGCGGCCGCGCCGGTTTCTCGCTGACGGAGGAAGGCCGCGAG                                                                                                                                                    <  4:276615/149‑1     CGGTGGCTTCTCGGCTGCCGAAAACGTACTGGGCATTGGTCGCTCGGCCATCAGCCAGCAGATGAACGACCTCGAGCAACGCCTCGGCCTGCGCCTGTGTCAGCGCGGCCGCGCCGGTTTCTCGCTGACGGAGGAAGGCCGCGAGGTC                                                                                                                                                 >  1:165603/1‑148                                                                    GAACGACCTCGAGCAACGCCTCGGCCTGAGCCTGTGTCAGCGCGGCCGCGCCGGTTTCTCGCTGACGGAGGAAGGCCGCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGCCGAGAAGCCA                                                                                 >  8:26615/1‑149                                                                      ACGACCTCGAGCAACGCCTCGGCCTGCGCCTGTGTCAGCGCGGCCGCGCCGGTTTCTCGCTGACGGAGGAAGGCCGCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGCCGAGAAGCCACC                                                                               >  6:91793/1‑149                                                                               AGCAACGCCTCGGCCTGCGCCTGTGTCAGCGCGGCCGCGCCGGTTTCTCGCTGACGGAGGAAGGCCGCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGCCGAGAAGCCACCGCACTCGAC                                                                      <  5:91793/149‑1                                                                                                   CTGTGTCAGCGCGGCCGCGCCGGTTTCTCGCTGACGGAGGAAGGCCGCGAG                                                                                                                                                    <  7:79047/51‑1                                                                                                   CTGTGTCAGCGCGGCCGCGCCGGTTTCTCGCTGACGGAGGAAGGCCGCGAG                                                                                                                                                    >  8:79047/1‑51                                                                                                                  CGCGCCGGTTTCTCGCTGACGGAGGAAGGCCGCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGCCGAGAAGCCACCGCACTCGACGACGCTGCGATAGATCTTCAGCAGGCGGATGTCGA                                   <  7:26615/149‑1                                                                                                                                                   GAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGCCGAGAAGCCACCGCACTCGACGACGCTGCGATAGATCTTCAGCAGGCGGATGTCGAAATCGCTGACTTGGGCGAGTGGATCGGGGCGTC  <  2:227699/149‑1                                                                                                                                                   GAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGCCGAGAAGCCACCGCACTCGACGAAGCTGCGATAGATCTTCAGCAGGCGGATGTCGAAAGAGCTGACTTGG                     >  8:61463/1‑130                                                                                                                                                                                                                                                                                                         AGTGCGGTGGCTTCTCGGCTGCCGAAAACGTACTGGGCATTGGTCGCTCGGCCATCAGCCAGCAGATGAACGACCTCGAGCAACGCCTCGGCCTGCGCCTGTGTCAGCGCGGCCGCGCCGGTTTCTCGCTGACGGAGGAAGGCCGCGAGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/693962‑693811 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaggtcGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGCCGAGAAGCCACCGCACTCGACGACGCTGCGATAGATCTTCAGCAGGCGGATGTCGAAATCGCTGACTTGGGCGAGTGGATCGGGGCGTC  >  NC_002947/693892‑694034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.