New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	693811 =	39 (0.760)	4 (0.080)	4/246	NT	10.1%	coding (231/918 nt)	PP_0595	LysR family transcriptional regulator
	?	NC_002947	693892 =	34 (0.700)					coding (150/918 nt)	PP_0595	LysR family transcriptional regulator

CAGGGCATGGGTGATACGCATGTGCGGCAGGGTCACCAGGTTGT‑CGGTCAGGCCGATGTTCAGCTCGCCGCGCAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGCCGAGAAGCCACCG  >  NC_002947/693664‑693958                                                                                                                                                     |                                                                                                                                                    cAGGGCATGGGTGATACGCATGTGCGGCAGGGTCACCAGGTTGT‑CGGTCAGGCCGATGTTCAGCTCGCCGCGCAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGa                                                                                                                                                    <  5:214962/149‑1 (MQ=255)      gacgccccgatccactcgcccaagtcagcgatttcgacatccgcctgctgaagatctatcgcagcgtcgtcgagtgcggtggcttctcggctgccgaaaacgtactgggcattggtcgctcggccatcagccagcagatgaacGACCTc                                                                                                                                                <  2:227699‑M1/6‑1 (MQ=255)          ggTGATACGCATGTGCGGCAGGGTCACCAGGTTGT‑CGGTCAGGCCGATGTTCAGCTCGCCGCGCAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGc                                                                                                                                           >  6:315886/1‑149 (MQ=255)                aCGCATGTGCGGCAGGGTCACCAGGTTGT‑CGGTCAGGCCGATGTTCAGCTCGCCGCGCAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTtcct                                                                                                                                     >  3:170102/1‑149 (MQ=255)                  ggaggtgCGGCAGGGTGACCAGGTTGT‑CGGTCAGGCAGATGTTCAGCTCGCCGCTGAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTtcctcc                                                                                                                                   <  3:185903/145‑1 (MQ=255)                  gCATGTGCGGCAGGGTCACCAGGTTGT‑CGGTCAGGCCGATGTTCAGCTCGCCGCGCAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTtcctcc                                                                                                                                   <  2:202122/149‑1 (MQ=255)                  gCATGTGCGGCAGGCTAACCAGGTTGTGCGGTCAGGCAGATGTTCAGCTCGCCGCGCAAATTCTGGTGCAGGCCGTTGACCACGCTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTACACCTCGCGGCCTtcctc                                                                                                                                    >  1:14450/1‑149 (MQ=255)                         ccaagtcagctctttcgacatccgcctgctgaagatctatcgcagcttcgtcgagtgcggtggcttctcggctgccgaaaacgtactgggcattggtcgctcggccatcagccagcagatgaacGACCTc                                                                                                                                                >  8:61463‑M1/125‑130 (MQ=255)                                 tCACCAGGTTGT‑CGGTCAGGCCGATGTTCAGCTCGCCGCGCAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCg                                                                                                                    >  2:318484/1‑149 (MQ=255)                                  cACCAGGTTGT‑CGGTCAGGCCGATGTTCAGCTCGCCGCGCAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCg                                                                                                                    >  4:223767/1‑148 (MQ=255)                                  cACCAGGTTGT‑CGGTCAGGCCGATGTTCAGCTCGCCGCGCAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCg                                                                                                                    <  3:223767/148‑1 (MQ=255)                                       tcgacatccgcctgctgaagatctatcgcagcgtcgtcgagtgcggtggcttctcggctgccgaaaacgtactgggcattggtcgctcggccatcagccagcagatgaacGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGcgcg                                                                                                               <  7:26615‑M1/39‑1 (MQ=255)                                                gTCAGGCCGATGTTCAGCTCGCCGCGCAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCt                                                                                                       >  7:54203/1‑148 (MQ=255)                                                 tCAGGCCGATGTTCAGCTCGCCGCGCAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGa                                                                                                     <  3:80955/149‑1 (MQ=255)                                                   aGGCCGATGTTCAGCTCGCCGCGCAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGac                                                                                                    <  5:315886/148‑1 (MQ=255)                                                      ccGATGTTCAGCTCGCCGCGCAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAg                                                                                                <  4:170102/149‑1 (MQ=255)                                                       cgttGTTCAGCTCGCCGCGCAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGGGCGGTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAgg                                                                                               <  2:270073/146‑1 (MQ=255)                                                                    gccgcGCAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGAGCTCGCGGCCTTCCTCCGTCAGCGAGaaaccgcctcggcctgcgcctgtgtcagcgcggccgcgcc                                                                                  <  7:232521‑M1/149‑41 (MQ=255)                                                                    gccgcGCAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAg                                                                                    <  3:297383/147‑1 (MQ=255)                                                                       gcgcAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGcaacgcctcggcctgcgcctgtgtcagcgcggccgcgccggtt                                                                               >  4:154626‑M1/1‑106 (MQ=255)                                                                       gcgcAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAgg                                                                                   <  7:186018/145‑1 (MQ=255)                                                                       gcgcAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAgg                                                                                   >  8:186018/1‑145 (MQ=255)                                                                          gtcgagtgcggtggcttctcggctgccgaaaacgtactgggcattggtcgctcggccatcagccagcagatgaacGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCt                                                                            <  5:91793‑M1/74‑1 (MQ=255)                                                                           aaaTGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGAcaca                                                                                                 >  8:286889/1‑127 (MQ=255)                                                                           aaaTGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGAcaca                                                                                                 <  7:286889/127‑1 (MQ=255)                                                                                cTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGcaacgcctcggcctgcgcctgtgtcagcgcggccgcgccggtttctcgctga                                                                      <  3:154626‑M1/149‑53 (MQ=255)                                                                                 tGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGcaacgcctcggcctgcgcctgtgtcagcgcggccgcgccggtttctcgctgac                                                                     <  8:302693‑M1/149‑54 (MQ=255)                                                                                 tGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACAC‑‑GCGCAGGCCGa                                                                                     <  5:300978/131‑1 (MQ=255)                                                                                 tGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACAC‑‑GCGCAGGCCGa                                                                                     >  6:300978/1‑131 (MQ=255)                                                                                 tGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTCCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAgggc                                                                     >  2:266950/1‑147 (MQ=255)                                                                                   ggtggcttctcggctgccgaaaacgtactgggcattggtcgctcggccatcagccagcagatgaacGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGt                                                                   >  6:91793‑M1/67‑149 (MQ=255)                                                                                   gTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCga                                                                   >  5:65843/1‑148 (MQ=255)                                                                                     tggcttctcggctgccgaaaacgtactgggcattggtcgctcggccatcagccagcagatgaacGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCTCAGGCCGAGGCGTTGCTCGAGGTCGTTc                                                                 >  8:26615‑M1/65‑149 (MQ=255)                                                                                     gCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGtt                                                                  >  5:168340/1‑148 (MQ=255)                                                                                        ggCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGc                                                                             <  8:233724‑M2/134‑2 (MQ=255)                                                                                        ggCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGc                                                                             >  7:233724‑M2/1‑133 (MQ=255)                                                                                               gACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTgctggc                                                       >  5:165265/1‑149 (MQ=255)                                                                                                aCCTCGGTGCTGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTgctggc                                                       <  8:54203/148‑1 (MQ=255)                                                                                                  cTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGa                                                    >  2:165603/1‑149 (MQ=255)                                                                                                   tCGGTGCGTAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGTTGAATGGTAGACCTCTGGGCATTCCTGCGTCTGCGATAAACCGGCTAGGCCGCGTTGACACTGGCGCAGGCAGAGGCGTTGCTCGAGGTCGTTAATCTGCTGGCTTAt                                                   <  2:14450/149‑1 (MQ=255)                                                                                                          ggAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAg                                            >  1:38213/1‑149 (MQ=255)                                                                                                          ggAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAg                                            >  3:255947/1‑149 (MQ=255)                                                                                                           gAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGc                                           >  1:227699/1‑149 (MQ=255)                                                                                                              ggTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGAc                                        >  1:117362/1‑149 (MQ=255)                                                                                                                                 aGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTc                     <  6:65843/149‑1 (MQ=255)                                                                                                                                 aGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTc                     <  3:241621/149‑1 (MQ=255)                                                                                                                                  gTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCg                    <  1:318484/149‑1 (MQ=255)                                                                                                                                       aGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGc               <  6:168340/149‑1 (MQ=255)                                                                                                                                        gggCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGcc              >  4:42940/1‑149 (MQ=255)                                                                                                                                            tGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGCCgag           >  2:171651/1‑148 (MQ=255)                                                                                                                                              aaTGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGCCGAGaa         <  1:209431/148‑1 (MQ=255)                                                                                                                                              aaTGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGCCGAGaa         <  4:255947/148‑1 (MQ=255)                                                                                                                                                  gTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGCCGAGAAGCCAc    >  5:122308/1‑149 (MQ=255)                                                                                                                                                   tAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTc                     <  4:166057/131‑1 (MQ=255)                                                                                                                                                   tAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTc                     >  3:166057/1‑131 (MQ=255)                                                                                                                                                     GACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGCCGAGAAGCCACCg  >  1:165603‑M1/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CAGGGCATGGGTGATACGCATGTGCGGCAGGGTCACCAGGTTGT‑CGGTCAGGCCGATGTTCAGCTCGCCGCGCAAATGCTGGTGCAGGCCGTTGACCTCGGTGCGGAAGGTTTCCAGCGCGCTGAGCAGTTGCAGGGCTGAATGGTAGACCTCGCGGCCTTCCTCCGTCAGCGAGAAACCGGCGCGGCCGCGCTGACACAGGCGCAGGCCGAGGCGTTGCTCGAGGTCGTTCATCTGCTGGCTGATGGCCGAGCGACCAATGCCCAGTACGTTTTCGGCAGCCGAGAAGCCACCG  >  NC_002947/693664‑693958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.