New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 694954	41 (0.790)	3 (0.060)	3/246	NT	7.5%	coding (795/1347 nt)	PP_0596	omega‑amino acid‑‑pyruvate aminotransferase
	?	NC_002947	= 694981	35 (0.720)					coding (822/1347 nt)	PP_0596	omega‑amino acid‑‑pyruvate aminotransferase

GATGCCTCCAACATCGCAGCAGTCATCGTCGA‑GCCGCTGGCCGGTTCGGCCGGTGTGCTGCCGCCGCCAAAGGGTTACCTGAAGCGCCTGCGTGAAATCTGCACCCAGCACAACATTCTGCTGATCTTCGACGAAGTGATCACAGGCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/694805‑694954 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcttcCGAGCCGGTCATCGCGCCCATGCGGCCGAAGCCTGTGATCACTTCGTCGAAGATCAGCAGAATGTTGTGCTGGGTGCAGATTTCACGCAGGCGCTTCAGGTAACCCTTTGGCGGCGGCAGCACACCGGCCGAACCGGCCAGCGGCT  <  NC_002947/694981‑694836                                                                                                                                                                                                                                                                                                           GATGCCTCCAACATCGCAGCAGTCATCGTCGA‑GCCGCTGGCCGGTTCGGCCGGAGTGCTGACGCCGCCAAAGGGTTACCTGAAGCGCCTGCGTGAAATCTGCACCCAGCACAACATTCTGCTGATCTTCGACGAAGTGATCACAGGCTT                                                                                                                                                     >  5:185315/1‑149   TGCCTCCAACATCGCAGCAGTCATCGTCGAGGCCGCTGGCCGGTTCGGCCGGTGTGCTGCCGCCGCCAAAGGGTTACCTGAAGCGCCTGCGTGAAATCTGCACCCAGCACAACATTCTGCTGATCTTCGACGAAGTGATCACAGGCTTC                                                                                                                                                    >  1:29516/1‑149   TGCCTCAAACATCGCAGCAGTCATCGTCGA‑GCCGCTGGCCGGTTCGGCCGGTGAGCTGCCGCCGCCAAAGCGTTACCTGAAGCGCCAGCGTGAAATCTGCACCCAGCACAACATTCTGCTGATCTTCGAAGAAGTGAACACAGGaatcg                                                                                                                                                   >  5:101120/1‑144                                           CGGTTCGGCCGGTGTGCTGCCGCCGCCAAAGGGTTACCTGAAGCGCCTGCGTGAAATCTGCACCCAGCACAACATTCTGCTGATCTTCGACGAAGTGATCACAGGCTTCCGAGCCGGTCATCGCGCCCATGCGGCCGAAGCCTGTGATC                                                                                                            <  2:330484/149‑1                                                                                             GTGAAATCTGCACCCAGCACAACATTCTGCTGATCTTCGACGAAGTGATCACAGGCTTCCGAGCCGGTCATCGCGCCCATGCGGCCGAAGCCTGTGATCACTTCGTCGAAGAT                                                                                              >  3:200723/1‑113                                                                                             GTGAAATCTGCACCCAGCACAACATTCTGCTGATCTTCGACGAAGTGATCACAGGCTTCCGAGCCGGTCATCGCGCCCATGCGGCCGAAGCCTGTGATCACTTCGTCGAAGAT                                                                                              <  4:200723/113‑1                                                                                                                                                     TTCCGAGCCGGTCATCGCGCCCATGCGGCCGAAGCCTGTGATCACTTCGTCGAAGATCAGCAGAATGTTGTGCTGGGTGCAGATTTCACGCAGGCGCTTCAGGTAACCCTTTGGCGGCGGCAGCACACCGGCCGAACCGGCCAGCGGCT  >  3:321068/1‑149                                                                                                                                                                                                                                                                                                           GATGCCTCCAACATCGCAGCAGTCATCGTCGA‑GCCGCTGGCCGGTTCGGCCGGTGTGCTGCCGCCGCCAAAGGGTTACCTGAAGCGCCTGCGTGAAATCTGCACCCAGCACAACATTCTGCTGATCTTCGACGAAGTGATCACAGGCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/694805‑694954 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcttcCGAGCCGGTCATCGCGCCCATGCGGCCGAAGCCTGTGATCACTTCGTCGAAGATCAGCAGAATGTTGTGCTGGGTGCAGATTTCACGCAGGCGCTTCAGGTAACCCTTTGGCGGCGGCAGCACACCGGCCGAACCGGCCAGCGGCT  <  NC_002947/694981‑694836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.