New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 772928	46 (0.890)	5 (0.100)	4/252	NT	9.7%	coding (591/1044 nt)	PP_0664	homoserine dehydrogenase
	?	NC_002947	= 772998	49 (0.980)					coding (661/1044 nt)	PP_0664	homoserine dehydrogenase

TGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACCCTGGCGGGCGCGGGCTTGGTAGGTTTCGAGGGCATTCTCAACGGTACCTCTAACTATGTGCTCACGCGCATGGAGGAAGGGCTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/772777‑772928 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcCTTCCACATCGGCGGTCGGGTCAGCCTCGGCAAAGCCAAGCGCTTGTGCCTGGGCCACCGCCTCGTTGAAGCCAAGCCCTTCCTCCATGCGCGTGAGCACATAGTTAGAGGTACCGTTGAGAATGCCCTCGAAACCTACCAAGCCCGC  <  NC_002947/772998‑772851                                                                                                                                                                                                                                                                                                              TGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACCCTGGCGGGCGCGGGCTTGGTAGGTTTCGAGGGCATTCTCAACGGTACCTCTAACTATGTGCTCACGCGCATGGAGGAAGGGCTT                                                                                                                                                         <  2:121618/149‑1   TCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACCCTGGCGGGCGCGGGCTTGGTAGGTTTCGAGGGCATTCTCAACGGTACCTCTAACTATGTGCTCACGCGCATGGAGGAAGGGCTTGG                                                                                                                                                       <  2:62039/149‑1     GTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACCCTGGCGGGCGCGGGCTTGGTAGGTTTCGAGGGCATTCTCAACGGTACCTCTAACTATGTGCTCACGCGCATGGAGGAAGGGCTTGGC                                                                                                                                                      <  5:74147/148‑1     GTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACCCTGGCGGGCGCGGGCTTGGTAGGTTTCGAGGGCATTCTCAACGGTACCTCTAACTATGTGCTCACGCGCATGGAGGAAGGGCTTGGC                                                                                                                                                      >  6:74147/1‑148                                  GCACACCGGTGCTGCGTATGGCGCGCCAGACCCTGGCGGGCGCGGGCTTGGTAGGTTTCGAGGGCATTCTCAACGGTACCTCTAACTATGTGCTCACGCGCATGGAGGAAGGGCTTGG‑CTTCCACATCGGCGGTCGGGTCAGCCTCGG                                                                                                                        >  2:49263/1‑148                                    ACACCGGTGCTGCGTATGGCGCGCCAGACCCTGGCGGGCGCGGGCTTGGTAGGTTTCGAGGGCATTCTCAACGGTACCTCTAACTATGTGCTCACGCGCATGGAGGAAGGGCTTGGCCTTCCACATCGGCGGTCGGGTCAGCCTCGGC                                                                                                                       >  5:258894/1‑148                                                                               GCTTGGTAGGTTTCGAGGGCATTCTCAACGGTACCTCTAACTATGTGCTCACGCGCATGGAGGAAGGGCTTGG‑CTTCCACATCGGCGGTCGGGTCAGCCTCGGCAAAGCCAAGCGCTTGTGCCTGGGCCACCGCCTCGTTGAAGCCAAG                                                                          <  1:49263/149‑1                                                                                CTTGGTAGGTTTCGAGGGCATTCTCAACGGTACCTCTAACTATGTGCTCACGCGCATGGAGGAAGGGCTTGGCCTTCCACATCGGCGGTCGGGTCAGCCTCGGCAAAGCCAAGCGCTTGTGCCTGGGCCACCGCCTCGTTGAAGCCAAG                                                                          <  5:184934/149‑1                                                                                    GTAGGTTTCGAGGGCATTCTCAACGGTACCTCTAACTATGTGCTCACGCGCATGGAGGAAGGGCTTGGCCTTCCACATCGGCGGTCGGGTCAGCCTCGGCAAAGCCAAGCGCTTGTGCCTGGGCCACCGCCTCGTTGAAGCCAAGCCC                                                                       <  6:258894/148‑1                                                                                                                                                      GGCCTTCCACATCGGCGGTCGGGTCAGCCTCGGCAAAGCCAAGCGCTTGTGCCTGGGCCACCGCCTCGTTGAAGCCAAGCCCTTCCTCCATGCGCGTGAGCACATAGTTAGA                                         >  1:53493/1‑112                                                                                                                                                      GGCCTTCCACATCGGCGGTCGGGTCAGCCTCGGCAAAGCCAAGCGCTTGTGCCTGGGCCACCGCCTCGTTGAAGCCAAGCCCTTCCTCCATGCGCGTGAGCACATAGTTAGA                                         <  2:53493/112‑1                                                                                                                                                        CCTTCCACATCGGCGGTCGGGTCAGCCTCGGCAAAGCCAAGCGCTTGTGCCTGGGCCACCGCCTCGTTGAAGCCAAGCGCTTCCTCCATGCGCGTGAGCACATAGTTAGAGGTACCGTTGAGAATGCCCTCGAAACCTACCAAGCCCGC  >  7:212090/1‑149                                                                                                                                                                                                                                                                                                              TGTCGTTCGAATACGAAGGCGCCGTCATGAGCGGCACACCGGTGCTGCGTATGGCGCGCCAGACCCTGGCGGGCGCGGGCTTGGTAGGTTTCGAGGGCATTCTCAACGGTACCTCTAACTATGTGCTCACGCGCATGGAGGAAGGGCTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/772777‑772928 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcCTTCCACATCGGCGGTCGGGTCAGCCTCGGCAAAGCCAAGCGCTTGTGCCTGGGCCACCGCCTCGTTGAAGCCAAGCCCTTCCTCCATGCGCGTGAGCACATAGTTAGAGGTACCGTTGAGAATGCCCTCGAAACCTACCAAGCCCGC  <  NC_002947/772998‑772851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.