| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1138531 = | 39 (0.760) | 3 (0.070) | 3/232 | NT | 8.1% | intergenic (‑62/+103) | arcC/arcB | carbamate kinase/ornithine carbamoyltransferase |
| ? | NC_002947 | 1138620 = | 33 (0.720) | intergenic (‑151/+14) | arcC/arcB | carbamate kinase/ornithine carbamoyltransferase | |||||
GGAAAACCGCATGCACACGATCAAGGCGATCCTGGTATCGACCCTGGCTGATCTATAAGTAGCCCGCAGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1138691‑1138531‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTGGCCAGGTCCGGG > NC_002947/1138620‑1138766 GGAAAACCGCATGCACACGATCAAGGCGATCCTGGTATCGACCCTGGCTGATCTATAAGTAGCCCGCAGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGC < 2:191352/149‑1GGAAAACCGCATGCACACGATCAAGGCGATCCTGGTATCGACCCTGGCTGATCTATAAGTAGCCCGCAGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGGCGACAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGC < 6:307902/149‑1 AACCGCATGCACACGATCAAGGCGATCCTGGTATCGACCCTGGCTGATCTATAAGTAGCCCGCAGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCCCGC > 2:145815/1‑149 AACCGCATGCACACGATCAAGGCGATCCTGGTATCGACCCTGGCTGATCTATAAGTAGCCCGCAGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCCCGC < 7:241316/149‑1 CCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTG > 2:91942/1‑149 GCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTC > 3:235021/1‑149 TCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGAT < 1:91942/149‑1 GCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTG < 4:96184/149‑1 CACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTGGCCAGGTCC < 5:40355/149‑1 CACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAACTCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATTCCGTTGGCCAGGTCC > 5:220913/1‑149 CAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTGGCCAGGTCCGG < 3:70935/149‑1 AGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTGGCCAGGTCCGGG < 8:45261/149‑1 AGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACATCGATGCCGTTGGCCAGGTCCGGG < 3:115216/149‑1 AGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGCCACTTCGATGCCGTTGGCCAGGTCCGGG < 8:287214/149‑1 GGAAAACCGCATGCACACGATCAAGGCGATCCTGGTATCGACCCTGGCTGATCTATAAGTAGCCCGCAGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1138691‑1138531‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTGGCCAGGTCCGGG > NC_002947/1138620‑1138766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |