New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1138531 = | 39 (0.760) | 3 (0.070) | 3/232 | NT | 8.1% | intergenic (‑62/+103) | arcC/arcB | carbamate kinase/ornithine carbamoyltransferase |
? | NC_002947 | 1138620 = | 33 (0.720) | intergenic (‑151/+14) | arcC/arcB | carbamate kinase/ornithine carbamoyltransferase |
GAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTGGCCAGGTCCGGG > NC_002947/1138473‑1138766 | gAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAgg > 3:155783/1‑148 (MQ=255) aTGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGCCCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGAc > 6:40355/1‑149 (MQ=255) cTTTCGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCg < 3:319339/148‑1 (MQ=255) aGCTAAAGAATTAATGGCCTGTCGCTGCACGGAAGCGGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCt < 8:117456/148‑1 (MQ=255) aGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCt < 6:60242/148‑1 (MQ=255) gCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTa < 8:214261/148‑1 (MQ=255) aGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTtata < 7:67330/149‑1 (MQ=255) atgaatgGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGa < 3:32388/148‑1 (MQ=255) gCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGa < 7:67560/148‑1 (MQ=255) aCGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAg > 6:187984/1‑149 (MQ=255) aaGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGa < 3:153840/147‑1 (MQ=255) aaGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTAGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGa > 4:153840/1‑147 (MQ=255) tGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCt > 7:241054/1‑149 (MQ=255) ggAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGa < 5:187984/149‑1 (MQ=255) gAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGAt < 4:155783/149‑1 (MQ=255) gCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCgtgt < 4:320659/148‑1 (MQ=255) GCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGtt < 7:241316‑M1/149‑1 (MQ=255) GCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGtt > 2:145815‑M1/1‑149 (MQ=255) GCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGTCGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTcc < 6:307902‑M1/149‑1 (MQ=255) GCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTcc < 2:191352‑M1/149‑1 (MQ=255) cccgcgaaggcgtcagccgcatcatcgatgatgtcaggtctggcctcttcgcgggcatgcccgctcccacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTg > 2:91942‑M2/73‑149 (MQ=255) cccGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTg > 2:252093/1‑149 (MQ=255) gcgaaggcgtcagccgcatcatcgatgatgtcaggtctggcctcttcgcgggcatgcccgctcccacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTc > 3:235021‑M2/70‑149 (MQ=255) aaGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCg > 3:110976/1‑147 (MQ=255) aaGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGaa < 8:241316/149‑1 (MQ=255) gtggCCAGACCTGACATCATCGTTGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACGAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAgg < 2:313934/147‑1 (MQ=255) gagGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAgg < 3:41663/149‑1 (MQ=255) ggCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGc > 7:287214/1‑148 (MQ=255) tcagccgcatcatcgatgatgtcaggtctggcctcttcgcgggcatgcccgctcccacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGAt < 1:91942‑M2/89‑1 (MQ=255) cAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGAt < 5:49685/112‑1 (MQ=255) cAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGAt > 6:49685/1‑112 (MQ=255) cAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATg > 4:145600/1‑149 (MQ=255) cTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGGTGCACGc > 7:143785/1‑149 (MQ=255) tcGATGATGCGGCGGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTc < 5:184393/149‑1 (MQ=255) gatgatGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCg > 8:68673/1‑148 (MQ=255) gCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGt > 3:96184/1‑149 (MQ=255) tcGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCg < 5:307902/146‑1 (MQ=255) ccGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCg < 1:191352/146‑1 (MQ=255) gCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCa > 4:70935/1‑149 (MQ=255) cTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACt > 7:45261/1‑149 (MQ=255) cgGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCGAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGAt < 8:241054/149‑1 (MQ=255) cgGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGGTGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGAt < 8:143785/149‑1 (MQ=255) aCGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGt > 8:78011/1‑149 (MQ=255) gcccgctcccacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTg < 4:96184‑M2/135‑1 (MQ=255) cacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTGGCCAGGTcc < 5:40355‑M2/144‑1 (MQ=255) cacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAACTCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATTCCGTTGGCCAGGTcc > 5:220913‑M2/6‑149 (MQ=255) cagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTGGCCAGGTCCgg < 3:70935‑M2/146‑1 (MQ=255) agGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTGGCCAGGTCCggg < 8:45261‑M2/147‑1 (MQ=255) agGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACATCGATGCCGTTGGCCAGGTCCggg < 3:115216‑M2/147‑1 (MQ=255) agGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGCCACTTCGATGCCGTTGGCCAGGTCCggg < 8:287214‑M2/147‑1 (MQ=255) | GAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTGGCCAGGTCCGGG > NC_002947/1138473‑1138766 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |