| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1407830 = | 47 (0.910) | 4 (0.080) | 4/248 | NT | 9.9% | coding (283/1509 nt) | PP_1230 | hypothetical protein |
| ? | NC_002947 | 1407882 = | 28 (0.570) | coding (335/1509 nt) | PP_1230 | hypothetical protein | |||||
TGATCGGGGCCTTTTCACCCGCAGCGGCGAACCATGGCGCAACGGCGTCATCCTTCTGCAGCGTGCTGTTGCTGACCGCCATTACCGGCATCAGCTTCAGTGACCTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGGTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1407980‑1407830‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcacTGAAGCTGATGCCGGTAATGGCGGTCAGCAACAGCACGCTGCAGAAGGATGACGCCGTTGCGCCATGGTTCGCCGCTGCGGGTGAAAAGGCCCCGATCAGCGCGCAGACCAGCCTGGGTTACGGCGGCAATGTGGTCAGCCAGGTTC > NC_002947/1407882‑1408028 TGATCGGGGCCTTTTCACCCGCAGCGGCGAACCATGGCGCAACGGCGTCATCCTTCTGCAGCGTGCTGTTGCTGACCGCCATTACCGGCATCAGCTTCAGTGACCTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGGTC > 4:187183/1‑149TGATCGGGGCCTTTTCACCCGCAGCGGCGAACCATGGCGCAACGGCGTCATCCTTCTGCAGCGTGCTGTTGCTGACCGCCATTACCGGCATCAGCTTCAGTGACCTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGGT > 3:47439/1‑148 ATCGGGGCCTTTTCACCCGCAGCGGCGAACCATGGCGCAACGGCGTCATCCTTCTGCAGCGTGCTGTTGCTGACCGCCATTACCGGCATCAGCTTCAGTGACCTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGGTCAC < 6:240515/149‑1 GCATCAGCTTCAGTGACCTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGGTCACTGAAGCTGATGCCGGTAATGGCGGTCAGCAACAGCACGCTGCAGAAGGATGACGCCGTTGCGCCATGGTTCGCCGCTGCGGGTG > 6:39819/1‑148 GTGACCTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGGTCACTGAAGCTGATGCCGGTAATGGCGGTCAGCAACAGCACGCTGCAGAAGGATGACGCCGTTGCGCCATGGTTCGCCGCTGCGGGTGAAAAGGC < 8:123444/143‑1 GTGACCTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGGTCACTGAAGCTGATGCCGGTAATGGCGGTCAGCAACAGCACGCTGCAGAAGCATGACGCCGTTGCGCCATGGTTCGCCGCTGCGGGTGAAAAGGC > 7:123444/1‑143 CTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGGTCACTGAAGCTGATGCCGGTAATGGCGGTCAGCAACAGCACGCTGCAGAAGGATGACGCCGTTGCGCCATGGTTCGCCGCTGCGGGTGAAAAGGCCCCGATCAGCGCGCAGA < 5:39819/149‑1 GTCACTGAAGCTGATGCCGGTAATGGCGGTCAGCAACAGCACGCTGCAGAAGGATGACGCCGTTGCGCCATGGTTCGCCGCTGCGGGTGAAAAGGCCCCGATCAGCGCGCAGACCAGCCTGGGTTACGGCGGCAATGTGGTCAGCCAGG > 7:132260/1‑149 ACTGAAGCTGATGCCGGTAATGGCGGTCAGCAACAGCACGCTGCAGAAGGATGACGCCGTTGCGCCATGGTTCGCCGCTGCGGGTGAAAAGGCCCCGATCAGCGCGCAGACCAGCCTGGGTTACGGCGGCAATGTGGTCAGCCAGGTTC > 8:205321/1‑149 CTGAAGCTGATGCCGGTAATGGCGGTCAGCAACAGCACGCTGCAGAAGGATGACGCCGTTGCGCCATGGTTCGCCGCTGCGGGTGAAAAGGCCCCGATCAGCGCGCAGACCAGCCTGGGTTACGGCGGCAATGTGGTCAGCCAGGTT > 4:289134/1‑147 CTGAAGCTGATGCAGGTAATGGCGGTCAGCAACAGCACGCTGCAGAAGGATGACGCCGTTGCGCCATGGTTCGCCGCTGCGGGTGAAAAGGCCCCGATCAGCGCGCAGACCAGCCTGGGTTACGGCGGCAATGTGGTCAGCCAGGTT > 8:141250/1‑147 TGATCGGGGCCTTTTCACCCGCAGCGGCGAACCATGGCGCAACGGCGTCATCCTTCTGCAGCGTGCTGTTGCTGACCGCCATTACCGGCATCAGCTTCAGTGACCTGACCCTCGACCACGGAAACGGGCCGTGCTCGATCTGGTCGGTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1407980‑1407830‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcacTGAAGCTGATGCCGGTAATGGCGGTCAGCAACAGCACGCTGCAGAAGGATGACGCCGTTGCGCCATGGTTCGCCGCTGCGGGTGAAAAGGCCCCGATCAGCGCGCAGACCAGCCTGGGTTACGGCGGCAATGTGGTCAGCCAGGTTC > NC_002947/1407882‑1408028 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |