New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1735443	44 (0.850)	3 (0.060)	3/250	NT	6.4%	coding (1081/1206 nt)	csdA	cysteine desulfurase
	?	NC_002947	= 1735471	45 (0.910)					coding (1053/1206 nt)	csdA	cysteine desulfurase

GCGCTTGGTGCGCCTGTTCCGGCAGGCTCATCGCAACAGCTCCAGGCCTTGGTCCAGCGCGTCGAAGAAACGCTGCACGTCATCGCTGTCGTTGTACAAACCCAGCGATACCCGTATCGCGCCCTCCAGCCCCAGCCCCTTCAGCAGTGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1735291‑1735443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatTGCCGTGCGTGCCGGTCACCACTGCGCCATGCCACTGCTGAAGGGGCTGGGGCTGGAGGGCGCGATACGGGTATCGCTGGGTTTGTACAACGACAGCGATGACGTGCAGCGTTTCTTCGACGCGCTGGACCAAGGCCTGGAGCTGTT  <  NC_002947/1735471‑1735325                                                                                                                                                                                                                                                                                                              GCGCTTGGTGCGCCTGTTCCGGCAGGCTCATCGCAACAGCTCCAGGCCTTGGTCCAGCGCGTCGAAGAAACGCTGCACGTCATCGCTGTCGTTGTACAAACCCAGCGATACCCGTATCGCGCCCTCCAGCCCCAGCCCCTTCAGCAGTG                                                                                                                                                         <  7:186365/149‑1                           CTCATCGCAACAGCTCCAGGCCTTGGTCCAGCGCGTCGAAGAAACGCTGCACGTCTTCGCTGTCGTTGTACAAACCCAGCGATACCCGTATCGCGCCCTCCAGCCCCAGCCCCTTCAGCAGTG                                                                                                                                                         <  2:19439/123‑1                           CTCATCGCAACAGCTCCAGGCCTTGGTCCAGCGCGTCGAAGAAACGCTGCACGTCATCGCTGTCGTTGTACAAACCCAGCGATACCCGTATCGCGCCCTCCAGCCCCAGCCCCTTCAGCAGTG                                                                                                                                                         >  1:19439/1‑123                                           CAGGCCTTGGTCCAGCGCGTCGAAGAAACGCTGCACGTCATCGCTGTCGTTGTACAAACCCAGCGATACCCGTATCGCGCCCTCCAGCCCCAGCCCCTTCAGCAGTGGCATTGCCGTGCGTGCCGGTCACCACTGCGCCATGCCACTG                                                                                                                <  1:299788/148‑1                                           CAGGCCTTGGTCCAGCGCGTCGAAGAAACGCTGCACGTCATCGCTGTCGTTGTACAAACCCAGCGATACCCGTATCGCGCCCTCCAGCCCCAGCCCCTTCAGCAGTGGCATTGCCGAGCGTGCCGGTCACCACTGCGCCATGCCACT                                                                                                                 <  6:263664/147‑1                                            AGGCCTTGGTCCAGCGCGTCGAAGAAACGCTGCACGTCATCGCTGTCGTTGTACAAACCCAGCGATACCCGTATCGCGCCCTCCAGCCCCAGCCCCTTCAGCAGTGGCATTGCCGTGCGTGCCGGTCACCACTGCGCCATGCCACTGCT                                                                                                              <  5:208054/149‑1                                                                                                                                                     GGCATTGCCGTGCGTGCCGGTCACCACTGCGCCATGCCACTGCTGAAGGGGCTGGGGCTGGAGGGCGCGATACGGGTATCGCTGGGTTTGTACAACGACAGCGATGACGTGCAGCGTTTCTTCGACGCGCTGGACCAAGGCCTGGAGCT     >  4:68724/1‑149                                                                                                                                                        ATTGCCGTGCGTGCCGGTCCCCACTGCGCCATGCCACTGCTGAAGGGGCTGGGGCTGGAGGGCGCGATACGGGTATCGCTGGGTTTGTACAACGACAGCAATGACGTGCAGCGTTTCTTCGACGCGCTGGACCAAGGCCTGGAGCTGTT  >  8:235919/1‑149                                                                                                                                                                                                                                                                                                              GCGCTTGGTGCGCCTGTTCCGGCAGGCTCATCGCAACAGCTCCAGGCCTTGGTCCAGCGCGTCGAAGAAACGCTGCACGTCATCGCTGTCGTTGTACAAACCCAGCGATACCCGTATCGCGCCCTCCAGCCCCAGCCCCTTCAGCAGTGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1735291‑1735443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatTGCCGTGCGTGCCGGTCACCACTGCGCCATGCCACTGCTGAAGGGGCTGGGGCTGGAGGGCGCGATACGGGTATCGCTGGGTTTGTACAACGACAGCGATGACGTGCAGCGTTTCTTCGACGCGCTGGACCAAGGCCTGGAGCTGTT  <  NC_002947/1735471‑1735325

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.