| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1741391 = | 35 (0.680) | 4 (0.080) | 4/246 | NT | 10.0% | coding (522/753 nt) | PP_1538 | hypothetical protein |
| ? | NC_002947 | 1741436 = | 39 (0.800) | coding (477/753 nt) | PP_1538 | hypothetical protein | |||||
TCTACGCAGCAGACGGACCCTGCGAATGGGCAGGTGACGAGGATGGCGTTGGCGATCCACGGTCAGCATGGAAGCCCAGCATCCACATGCCCCGCGTGGCCGGCCGAATCCTGCTGGAGGTCACCGACGTGCGTGTCGAGCGCCTGCAGGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1741542‑1741391‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggatTCGGCCGGCCACGCGGGGCATGTGGATGCTGGGCTTCCATGCTGACCGTGGATCGCCAACGCCATCCTCGTCACCTGCCCATTCGCAGGGTCCGTCTGCTGCGTAGACAATGTGGCCTGAGTAATAGCCGCGCCCGAACCGCATTTCG > NC_002947/1741436‑1741583 TCTACGCAGCAGACGGACCCTGCGAATGGGCAGGTGACGAGGATGGCGTTGGCGATCCACGGTCAGCATGGAAGCCCAGCATCCACATGCCCCGCGTGGCCGGCCGAATCCTGCTGGAGGTCACCGACGTGCGTGTCGAGCGCCTGCAG > 4:238796/1‑149 TACGCAGCAGACGGACCCTGCGAATGGGCAGGTGACGAGGATGGCGTTGGCGATCCACGGTCAGCATGGAAGCCCAGCATCCACATGCCCCGCGTGGCCGGCCGAATCCTGCTGGAGGTCACCGACGTGCGTGTCGAGCGCCTGCAGGA > 8:184972/1‑149 ACGCAGCAGACGGACCCTGCGAATGGGCAGGTGACGAGGATGGCGTTGGCGATCCACGGTCAGCATGGAAGCCCAGCATCCACATGCCCCGCGTGGCCGGCCGAATCCTGCTGGAGGTCACCGACGTGCGTGTCGAGCGCCTGCAGGAT > 6:144197/1‑149 TCCTGCTGGAGGTCACCGACGTGCGTGTCGAGCGCCTGCAGGATTCGGCCGGCCACGCGGGGCATGTGGATGCTGGGCTTCCATGCTGACCGTGGATCGCCAACGCCATCCTCGTCACCTGCCCATTCGCAGGGTCCGTCTGCTGCG > 5:309036/1‑147 GAGGTCACCGACGTGCGTGTCGAGCGCCTGCAGGATTCGGCCGGCCACGCGGGGCATGTGGATGCTGGGCTTCCATGCTGACCGTGGATCGCCAACGCCATCCTCGTCACCTGCCCATTCGC > 5:278382/1‑122 GAGGTCACCGACGTGCGTGTCGAGCGCCTGCAGGATTCGGCCGGCCACGCGGGGCATGTGGATGCTGGGCTTCCATGCTGACCGTGGATCGCCAACGCCATCCTCGTCACCTGCCCATTCGC < 6:278382/122‑1 GTGCGTGTCGAGCGCCTGCAGGATTCGGCCGGCCACGCGGGGCATGTGGATGCTGGGCTTCCATGCTGACCGTGGATCGCCAACGCCATCCTCGTCACCTGCCCATTCGCAGGGTCCGTCTGCTGCGTAGACAATGTGGCCTGAGTAAT < 6:309036/149‑1 GGATTCGGCCGGCCACGCGGGGCATGTGGATGCTGGGCTTCCATGCTGACCGTGGATCGCCAACGCCATCCTCGTCACCTGCCCATTCGCAGGGTCCGTCTGCTGCGTAGACAATGTGGCCTGAGTAATAGCCGCGCCCGAACCGCATT < 5:75444/149‑1 TTCGGCCGGCCACGCGGGGCATGTGGATGCTGGGCTTCCATGCTGACCGTGGATCGCCAACGCCATCCTCGTCACCTGCCCATTCGCAGGGTCCGTCTGCTGCGTAGACAATGTGGCCTGAGTAATAGCCGCGCCCGAACCGCATTTCG > 5:89984/1‑149 TCTACGCAGCAGACGGACCCTGCGAATGGGCAGGTGACGAGGATGGCGTTGGCGATCCACGGTCAGCATGGAAGCCCAGCATCCACATGCCCCGCGTGGCCGGCCGAATCCTGCTGGAGGTCACCGACGTGCGTGTCGAGCGCCTGCAGGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1741542‑1741391‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggatTCGGCCGGCCACGCGGGGCATGTGGATGCTGGGCTTCCATGCTGACCGTGGATCGCCAACGCCATCCTCGTCACCTGCCCATTCGCAGGGTCCGTCTGCTGCGTAGACAATGTGGCCTGAGTAATAGCCGCGCCCGAACCGCATTTCG > NC_002947/1741436‑1741583 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |