| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1790646 | 32 (0.620) | 4 (0.080) | 4/250 | NT | 11.3% | coding (576/1215 nt) | dxr | 1‑deoxy‑D‑xylulose‑5‑phosphate reductoisomerase |
| ? | NC_002947 | = 1790684 | 32 (0.640) | coding (614/1215 nt) | dxr | 1‑deoxy‑D‑xylulose‑5‑phosphate reductoisomerase | |||||
TCCGGCGCACTGTTCATGGAGGCGGTGCGGCAAAAGGGTGCCGTGCTGCTGCCGATCGACAGCGAACACAACGCTATCTTCCAGTGCATGCCAGGCGACTACGCCCGTGGCCTGAGTGCCGTCGGTGTGCGCCGGATCCTGCTTACCGCGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1790494‑1790646‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtccAGCAGCGCCTCGACCGGCGTTTCGCGGAACGGCCCGCCGGACGCGGTAAGCAGGATCCGGCGCACACCGACGGCACTCAGGCCACGGGCGTAGTCGCCTGGCATGCACTGGAAGATAGCGTTGTGTTCGCTGTCGATCGGCAGCA < NC_002947/1790684‑1790540 TCCGGCGCACTGTTCATGGAGGCGGTGCGGCAAAAGGGTGCCGTGCTGCTGCCGATCGACAGCGAACACAACGCTATCTTCCAGTGCATGCCAGGCGACTACGCCCGTGGCCTGAGTGCCGTCGGTGTGCGCCGGATCCTGCTTACCGC < 1:14025/149‑1 GGCGCACTGTTCATGGAGGCGGTGCGGCAAAAGGGTGCCGTGCTGCTGCCGATCGACAGCGAACACAACGCTATCTTCCAGTGCATGCCAGGCGACTACGCCCGTGGCCTGAGTGCCGTCGGTGTGCGCCGGATCCTGCTTACCGCGTC < 8:94650/149‑1 GCGCACTGTTCATGGAGGCGGTGCGGCAAAAGGGTGCCGTGCTGCTGCCGATCGACAGCGAACACAACGCTATCTTCCAGTGCATGCCAGGCGACTACGCCCGTGGCCTGAGTGCCGTCGGTGTGCGCCGGATCCTGCTTACCGCGTCC > 3:34643/1‑149 CAAAAGGGTGCCGTGCTGCTGCCGATCGACAGCGAACACAACGCTATCTTCCAGTGCATGCCAGGCGACTACGCCCGTGGCCTGAGTGCCGTCGGTGTGCGCCGGATCCTGCTTACCGCGTCCAGCAGCGCCTCGACCGGCGTTTCGCG > 5:1401/1‑149 CGATCGACAGCGAACACAACGCTATCTTCCAGTGCATGCCAGGCGACTACGCCCGTGGCCTGAGTGCCGTCGGTGTGCGCCGGATCCTGCTTACCGCGTCCAGCAGCGCCTCGACCGGCGTTTCGCGGAACGGCCCGCCGGACGCGGTA < 6:1401/149‑1 CGATCGACAGCGAACACAACGCTATCTTCCAGTGCATGCCAGGCGACTACGCCCGTGGCCTGAGTGCCGTCGATGTGCGCCGGATCCTGCTTACCGCGTCCAGCAGCGCCTCGACCGGCGTTTCGCGGAACGGCCCGCCG > 7:157925/1‑140 CGATCGACAGCGAACACAACGCTATCTTCCAGTGCATGCCAGGCGACTACGCCCGTGGCCTGAGTGCCGTCGATGTGCGCCGGATCCTGCTTACCGCGTCCAGCAGCGCCTCGACCGGCGTTTCGCGGAACGGCCCGCCG < 8:157925/140‑1 GTCCAGCAGCGCCTCGACCGGCGTTTCGCGGAACGGCCCGCCGGACGCGGTAAGCAGGATCCGGCGCACACCGACGGCACTCAGGCCACGGGCGTAGTCGCCTGGCATGCACTGGAAGATAGCGTTGTGTTCGCTGTCGATCGGCAGCA < 6:146546/149‑1 GTCCAGCAGCGCCTCGACCGGCGTTTCGCGGAACGGCCCGCCGGACGCGGTAAGCAGGATCCGGCGCACACCGACG > 3:22591/1‑76 GTCCAGCAGCGCCTCGACCGGCGTTTCGCGGAACGGCCCGCCGGACGCGGTAAGCAGGATCCGGCGCACACCGACG < 4:22591/76‑1 TCCGGCGCACTGTTCATGGAGGCGGTGCGGCAAAAGGGTGCCGTGCTGCTGCCGATCGACAGCGAACACAACGCTATCTTCCAGTGCATGCCAGGCGACTACGCCCGTGGCCTGAGTGCCGTCGGTGTGCGCCGGATCCTGCTTACCGCGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1790494‑1790646‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtccAGCAGCGCCTCGACCGGCGTTTCGCGGAACGGCCCGCCGGACGCGGTAAGCAGGATCCGGCGCACACCGACGGCACTCAGGCCACGGGCGTAGTCGCCTGGCATGCACTGGAAGATAGCGTTGTGTTCGCTGTCGATCGGCAGCA < NC_002947/1790684‑1790540 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |