New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2303099 =	86 (1.670)	5 (0.100)	3/246	NT	5.6%	intergenic (‑184/+111)	PP_mr30/PP_2027	C4 ncRNA/hypothetical protein
	?	NC_002947	2303144 =	86 (1.760)					intergenic (‑229/+66)	PP_mr30/PP_2027	C4 ncRNA/hypothetical protein

GCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2303251‑2303099 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgcaAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACC  >  NC_002947/2303144‑2303287                                                                                                                                                                                                                                                                                                           GCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGG                                                                                                                                                      >  4:131195/1‑149  CGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGC                                                                                                                                                     <  6:118501/149‑1     GCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTCCCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCG                                                                                                                                                    >  8:275389/1‑147                                   CCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAAACTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGAGAACACCGGCGC                                                                                                                                                   >  4:110163/1‑118                                   CCAAGTAAGTGGTTGCCTGGGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCtc                                                                                                                                                   <  3:110163/118‑3                                                                                                           CTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTC                                            >  1:235200/1‑149                                                                                                           CTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTC                                            >  2:265443/1‑149                                                                                                           CTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGC                                                                >  7:246457/1‑129                                                                                                           CTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGC                                                                <  8:246457/129‑1                                                                                                            TTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCG                                           >  7:219176/1‑149                                                                                                                                                   CGGCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGT     <  5:35294/148‑1                                                                                                                                                     GCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACC  <  1:6151/149‑1                                                                                                                                                     GCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGC                 <  1:89941/134‑1                                                                                                                                                     GCGCAAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGC                 >  2:89941/1‑134                                                                                                                                                                                                                                                                                                           GCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2303251‑2303099 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgcaAGGTTCTCGGCGTACGCGGTCAGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACC  >  NC_002947/2303144‑2303287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.