| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2392868 = | 83 (1.610) | 4 (0.080) | 4/246 | NT | 5.0% | coding (1397/2403 nt) | PP_2097 | sensory box protein |
| ? | NC_002947 | 2392908 = | 72 (1.470) | coding (1437/2403 nt) | PP_2097 | sensory box protein | |||||
ACTGAGCTTTTCCAGCAACCGGTCACGCGCTGCCAACGCCTCATGCACCCGGCGCCGCTCGGTCACGTCAATGCAGATGGCCAGGTAGCCAACCCACAACCCCTGTTCGTCGAGCATGGCAGTCACCAGCATGTTGGCGACCAGCTGGCTGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2393022‑2392868‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccatGCTCGACGAACAGGGGTTGTGGGTTGGCTACCTGGCCATCTGCATTGACGTGACCGAGCGGCGCCGGGTGCATGAGGCGTTGGCAGCGCGTGACCGGTTGCTGGAAAAGCTCAGTGCCGAGGTGCCGGGCGGCATCTACCAATATC > NC_002947/2392908‑2393053 ACTGAGCTTTTCCAGCAACCGGTCACGCGCTGCCAACGCCTCATGCACCCGGCGCCGCTCGGTCACGTCAATGCAGATGGCCAGGTAGCCAACCCACAACCCCTGTTCGTCGAGCATGGCAGTCACCAGCATGTTGGCGACCAGCTGGC > 8:251377/1‑149 CTGAGCTTTTCCAGCAACCGGTCACGCGCTGCCAACGCCTCATGCACCCGGCGCCGCTCGGTCACGTCAATGCAGATGGCCAGGTAGCCAACCCACAACCCCTGTTCGTCGAGCATGGCAGTCACCAGCATGTTGGCGACCAGCTGGCT < 7:163037/149‑1 TGAGCTTTTCCAGCAACCGGTCACGCGCTGCCAACGCCTCATGCACCCGGCGCCGCTCGGTCACGTCAATGCAGATGGCCAGGTAGCCAACCCACAACCCCTGTTCGTCGAGCATGGCAGTCACCAGCATGTTGGCGACCAGCTGGCTG > 7:246596/1‑149 TCGAGCATGGCAGTCACCAGCATGTTGGCGACCAGCTGGCTGCCATGCTCGACGAACAGGGGTTGTGGGTTGGCTACCTGGCCATCTGCATTGACGTGACCGAGCGGCGCCGGGTGCATGAGGCGTTGGCAGCGCGTGACCGGTTGCTG > 4:147661/1‑149 ATGGCAGTCACCAGCATGTTGGCGACCAGCTGGCTGCCATGCTCGACGAACAGGGGTTGTGGGTTGGCTACCTGGCCATCTGCATTGACGTGACCGAGCGGCGCCGGGTGCATGAGGCGTTGGCAGCGC < 5:326534/129‑1 ATGGCAGTCACCAGCATGTTGGCGACCAGCTGGCTGCCATGCTCGACGAACAGGGGTTGTGGGTTGGCTACCTGGCCATCTGCATTGACGTGACCGAGCGGCGCCGGGTGCATGAGGCGTTGGCAGCGC > 6:326534/1‑129 CAGCATGTTGGCGACCAGCTGGCTGCCATGCTCGACGAACAGGGGTTGTGGGTTGGCTACCTGGCCATCTGCATTGACGTGACCGAGCGGCGCCGGGTGCATGAGGCGTTGGCAGCGCGTGACCGGTTGCTGGAAAAGCTCAGTGCCGA < 3:147661/149‑1 TGCCATGCTCGACGAACAGGGGTTGTGGGTTGGCTACCTGGCCATCTGCATTGACGTGACCGAGCGGCGCCGGGTGCATGAGGCGTTGGCAGCGCGTGACCGGTTGCTGGAAAAGCTCAGTGCCGAGGTGCCGGGCGGCATCTACCAA > 4:274004/1‑148 TGCCATGCTAGACGAACAGGGGTTGTGGGTTGGCTACCTGGCCATCTGCATTGACGTGACAGAGCGGCGCCGGGTGAATGAGGCGTTGGCAGCTCGTGACCGGTTGCTGGATAAGCTCAGTGCCGAGGTGCCGGGAGGCATCTACCAA > 6:276851/1‑148 CCATGCTCGACGAACAGGGGTTGTGGGTTGGCTACCTGGCCATCTGCATTGACGTGACCGAGCGGCGCCGGGTGCATGAGGCGTTGGCAGCGCGTGACCGGTTGCTGGAAAAGCTCAGTGCCGAGGTGCCGGGCGGCATCTACCAAT < 3:132849/147‑1 CATGCTCGACGAACAGGGGTTGTGGGTTGGCTACCTGGCCATCTGCATTGACGTGACCGAGCGGCGCCGGGTGCATGAGGCGTTGGCAGCGCGTGACCGGTTGCTGGAAAAGCTCAGTGCCGAGGTGCCGGGCGGCATCTACCAATATC < 2:109809/149‑1 ACTGAGCTTTTCCAGCAACCGGTCACGCGCTGCCAACGCCTCATGCACCCGGCGCCGCTCGGTCACGTCAATGCAGATGGCCAGGTAGCCAACCCACAACCCCTGTTCGTCGAGCATGGCAGTCACCAGCATGTTGGCGACCAGCTGGCTGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2393022‑2392868‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccatGCTCGACGAACAGGGGTTGTGGGTTGGCTACCTGGCCATCTGCATTGACGTGACCGAGCGGCGCCGGGTGCATGAGGCGTTGGCAGCGCGTGACCGGTTGCTGGAAAAGCTCAGTGCCGAGGTGCCGGGCGGCATCTACCAATATC > NC_002947/2392908‑2393053 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |