| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2621926 = | 37 (0.720) | 3 (0.060) | 3/246 | NT | 7.0% | intergenic (+300/‑41) | PP_2294/PP_5515 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 2621965 = | 45 (0.920) | intergenic (+339/‑2) | PP_2294/PP_5515 | hypothetical protein/hypothetical protein | |||||
CATGTGCCAGGTCAGGTAACGCATGATGAGGATGTATATAAAGAAGCCCACGGGGGCCAGGAGGATGCCCAGGAGGTGAATCCCTTGGACAGTCTTGATGAGGCGCATTG‑GGGCTCTCATTGGCTGCTGGAGGCGGCACTATAGAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2622074‑2621926‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agagcccCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGTACGGCTCCAATGA > NC_002947/2621965‑2622112 CATGTGCCAGGTCAGGTAACGCATGATGAGGATGTATATAAAGAAGCCCACGGGGGCCAGGAGGATGCCCAGGAGGTGAATCCCTTGGACAGTCTTGATGAGGCGCATTGCGGGCTCTCATTGGCTGCTGGAGGCGGCACTATAGAG < 1:220708/147‑1CATGTGCCAGGTCAGGTAACGCATGATGAGGATGTATATAAAGAAGCCCACGGGGGCCAGGAGGATGCCCAGGAGGTGAATCCCTTGGACAGTCTTGATGAGGCGCATTG‑GGGCTCTCATTGGCTGCTGGAGGCGGCACTATAGAGCCC > 7:26892/1‑149CATGTGCCAGGTCAGGTAACGCATGATGAGGATGTATATAAAGAAGCCAACGGGGGCCAGGAGGATGACCAGGAGGTGAATCACTTGGACAGTCTTGATGAGGCGCATTG‑GGGCTCTCATAGGCTGCTGGAGGAGGCACTATAGAGCCC > 1:76501/1‑149 TTG‑GGGCTCTCATTGGCTGCTGGAGGCGGCACTATAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCA > 5:141860/1‑148 TCTCATTGGCTGCTGGAGGCGGCACTATAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATA > 5:37053/1‑111 TCTCATTGGCTGCTGGAGGCGGCACTATAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATA < 6:37053/111‑1 TATAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGTACGG < 6:141860/149‑1 AGAGCCCCAATTCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGTACGTCT < 8:169052/148‑1 GAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGTACGGCTCC < 1:208942/149‑1 CCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACATCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGTACGGCTCCAAT > 7:304284/1‑148 CCCAATCCGCCTCATCAACACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTCGCACATGGACTCCCTCACGGCTTACGTGCGGTACGGCTCCAAT < 8:304284/148‑1 CCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGTACGGCTCCAATGA < 4:161474/149‑1 CATGTGCCAGGTCAGGTAACGCATGATGAGGATGTATATAAAGAAGCCCACGGGGGCCAGGAGGATGCCCAGGAGGTGAATCCCTTGGACAGTCTTGATGAGGCGCATTG‑GGGCTCTCATTGGCTGCTGGAGGCGGCACTATAGAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2622074‑2621926‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agagcccCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGTACGGCTCCAATGA > NC_002947/2621965‑2622112 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |