| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2621926 = | 37 (0.720) | 3 (0.060) | 3/246 | NT | 7.0% | intergenic (+300/‑41) | PP_2294/PP_5515 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 2621965 = | 45 (0.920) | intergenic (+339/‑2) | PP_2294/PP_5515 | hypothetical protein/hypothetical protein | |||||
TGGTCTATCATGGAGATGCAGTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGTACGGCTCCAATGA > NC_002947/2621820‑2622112 | tgccaggtcaggtaacgcatgatgaggatgtatataaagaagcccacgggggccaggaggatgcccaggaggtgaatcccttggacagtcttgatgaggcgcattgGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑Caa > 5:141860‑M1/107‑148 (MQ=255) aTGCAGTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGAc > 2:38139/1‑149 (MQ=255) aGTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTc > 3:113494/1‑149 (MQ=255) gTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTc > 5:334079/1‑148 (MQ=255) aTTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTg < 7:115104/139‑1 (MQ=255) aTTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTg > 8:115104/1‑139 (MQ=255) cATGTCTAGTGGTCATTAATTACCACGACCATCATCATCCCTGCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTc < 8:171629/148‑1 (MQ=255) tctcTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCAcc > 8:26892/1‑149 (MQ=255) gTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCa < 1:38139/149‑1 (MQ=255) ccaccaTCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGccccc > 6:238430/1‑149 (MQ=255) ccaccaTCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCAAAGGGATTCACCTCCTGGGCATCCTCCTGcccaac > 2:167858/1‑146 (MQ=255) accaTCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGt < 4:113494/149‑1 (MQ=255) ccaTCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTg > 4:136694/1‑149 (MQ=255) tcatcatcCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGc > 3:161474/1‑149 (MQ=255) tcCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCttt < 3:136694/149‑1 (MQ=255) ctcctTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTc > 2:296555/1‑98 (MQ=255) ctcctTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTc < 1:296555/98‑1 (MQ=255) tcctTTATATACCTTCACTATACCATCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTtata > 2:76501/1‑148 (MQ=255) ctTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATAc < 1:167858/149‑1 (MQ=255) tatataCCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATc > 7:16434/1‑149 (MQ=255) atataCCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATcc > 7:169052/1‑149 (MQ=255) tataCCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCt > 5:281388/1‑149 (MQ=255) ccTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCtcat < 8:16434/148‑1 (MQ=255) ttCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTcatcat > 2:82911/1‑149 (MQ=255) ttCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTcatcat > 2:306307/1‑149 (MQ=255) tataCCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGt > 8:82925/1‑148 (MQ=255) ccTCCCCCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTacct > 2:176818/1‑148 (MQ=255) ccTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTacctg > 2:208942/1‑149 (MQ=255) ccTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTacctg > 6:71212/1‑149 (MQ=255) ccTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTacct > 7:97810/1‑148 (MQ=255) aCCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTacctgacctg > 2:71695/1‑149 (MQ=255) ccGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGc < 5:71212/149‑1 (MQ=255) ttggggctctcattggctgctggaggcggcactatagagcccCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGca > 5:141860‑M2/43‑148 (MQ=255) GGGCTCTATAGTGCCTCCTCCAGCAGCCTATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGTGATTCACCTCCTGGTCATCCTCCTGGCCCCCGTTGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATg > 1:76501‑M1/1‑149 (MQ=255) GGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATg > 7:26892‑M1/1‑149 (MQ=255) CTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCGCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATg < 1:220708‑M1/147‑1 (MQ=255) tctcattggctgctggaggcggcactatagagcccCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTtatata < 6:37053‑M2/76‑1 (MQ=255) tctcattggctgctggaggcggcactatagagcccCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTtatata > 5:37053‑M2/36‑111 (MQ=255) gTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCa < 2:220708/149‑1 (MQ=255) ccgccTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTac > 8:180582/1‑121 (MQ=255) ccgccTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTac < 7:180582/121‑1 (MQ=255) ccgccTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACg < 6:334079/148‑1 (MQ=255) cgccTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCGCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGGTTCTTTATATACATCCTCCTGATGCGTTACCTGACGTGGCACATGGCGTCCCGCAGGGc > 8:63130/1‑149 (MQ=255) cTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATgg < 7:269955/133‑1 (MQ=255) cTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATgg > 8:269955/1‑133 (MQ=255) tCCAGCAGCCAATGAGAGCCC‑CAATCCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCCCATGGACTCCCTCACGGCTTAc > 5:39828/1‑149 (MQ=255) agcagcCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCAAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTg > 4:204177/1‑149 (MQ=255) gcagcCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGc < 3:204177/149‑1 (MQ=255) agcCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATAACTCCTCATCATGAGTTACCTGACATGGCACATGGCCTCCCTCACGGCTGACGGGCgg > 6:223150/1‑149 (MQ=255) gcCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCCTGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCgg > 6:307947/1‑148 (MQ=255) gcCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGt < 1:71695/149‑1 (MQ=255) ccAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGTa > 8:179711/1‑149 (MQ=255) cAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGTAc < 8:97810/149‑1 (MQ=255) tatagagcccCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGTACgg < 6:141860‑M2/139‑1 (MQ=255) agagcccCAATTCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGTACGTCt < 8:169052‑M2/141‑1 (MQ=255) gagcccCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGTACGGCTcc < 1:208942‑M2/143‑1 (MQ=255) ccCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACATCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGTACGGCTCCAAt > 7:304284‑M2/3‑148 (MQ=255) ccCAATCCGCCTCATCAACACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTCGCACATGGACTCCCTCACGGCTTACGTGCGGTACGGCTCCAAt < 8:304284‑M2/146‑1 (MQ=255) cCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGTACGGCTCCAATGa < 4:161474‑M2/148‑1 (MQ=255) | TGGTCTATCATGGAGATGCAGTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCC‑CAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATGGACTCCCTCACGGCTTACGTGCGGTACGGCTCCAATGA > NC_002947/2621820‑2622112 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |