| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2621926 = | 37 (0.720) | 3 (0.060) | 3/246 | NT | 7.0% | intergenic (+300/‑41) | PP_2294/PP_5515 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 2621965 = | 45 (0.920) | intergenic (+339/‑2) | PP_2294/PP_5515 | hypothetical protein/hypothetical protein | |||||
CTCTCTTTATGGGGGGTAGGGGGGCTAACTGAGGTTTCCTAATGGTCTATCATGGAGATGCAGTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATG > NC_002947/2621778‑2622074 | tcattggagccgtaccgcacgtaagccgtgagggagtccatgtgccaggtcaggtaacgcatgatgaggatgtatataaagaagcccacgggggccaggaggatgcccaggaggtgaatcccttggacagtcttgatgaggcgcattgg < 4:161474‑M1/1‑1 (MQ=255) attggagccgtaccgcacgtaagccgtgagggagtccatgtgcgaggtcaggtaacgcatgatgaggatgtatataaagaagcccacgggggccaggaggatgcccaggaggtgaatcccttggacagtgttgatgaggcggattggg < 8:304284‑M1/2‑1 (MQ=255) attggagccgtaccgcacgtaagccgtgagggagtccatgtgccaggtcaggtaacgcatgatgaggatgtatataaagaagcccacgggggccaggaggatgcccaggatgtgaatcccttggacagtcttgatgaggcgcattggg > 7:304284‑M1/147‑148 (MQ=255) ggagccgtaccgcacgtaagccgtgagggagtccatgtgccaggtcaggtaacgcatgatgaggatgtatataaagaagcccacgggggccaggaggatgcccaggaggtgaatcccttggacagtcttgatgaggcgcattgGGGctc < 1:208942‑M1/6‑1 (MQ=255) agacgtaccgcacgtaagccgtgagggagtccatgtgccaggtcaggtaacgcatgatgaggatgtatataaagaagcccacgggggccaggaggatgcccaggaggtgaatcccttggacagtcttgatgaggcgaattgGGGctct < 8:169052‑M1/7‑1 (MQ=255) ccgtaccgcacgtaagccgtgagggagtccatgtgccaggtcaggtaacgcatgatgaggatgtatataaagaagcccacgggggccaggaggatgcccaggaggtgaatcccttggacagtcttgatgaggcgcattgGGGCTCtata < 6:141860‑M1/10‑1 (MQ=255) aGGATTCCTAATGCTCTATCATGGAGATGCATTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCAACATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCaa < 8:156712/147‑1 (MQ=255) tttCCTAATGGTCTATCATGGAGATGCAGTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCtata > 2:117693/1‑124 (MQ=255) tttCCTAATGGTCTATCATGGAGATGCAGTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATgaga < 2:178681/149‑1 (MQ=255) tgccaggtcaggtaacgcatgatgaggatgtatataaagaagcccacgggggccaggaggatgcccaggaggtgaatcccttggacagtcttgatgaggcgcattgGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCaa > 5:141860‑M1/107‑148 (MQ=255) tGGAGATGCAGTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGct < 1:330938/101‑1 (MQ=255) tGGAGATGCAGTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGct > 2:330938/1‑101 (MQ=255) aTGCAGTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGAc > 2:38139/1‑149 (MQ=255) aGTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCta < 4:263315/95‑1 (MQ=255) aGTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCta > 3:263315/1‑95 (MQ=255) aGTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTc > 3:113494/1‑149 (MQ=255) gTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTc > 5:334079/1‑148 (MQ=255) aCTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAg > 4:25120/1‑94 (MQ=255) aCTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAg < 3:25120/94‑1 (MQ=255) aTTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTg > 8:115104/1‑139 (MQ=255) aTTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTg < 7:115104/139‑1 (MQ=255) tatataaagaagcccacgggggccaggaggatgcccaggaggtgaatcccttggacagtcttgatgaggcgcattgGGGCTCTATAGTGCCGCCTCCAGCAGCCAATgaga > 5:37053‑M1/77‑111 (MQ=255) tatataaagaagcccacgggggccaggaggatgcccaggaggtgaatcccttggacagtcttgatgaggcgcattgGGGCTCTATAGTGCCGCCTCCAGCAGCCAATgaga < 6:37053‑M1/35‑1 (MQ=255) cATGTCTAGTGGTCATTAATTACCACGACCATCATCATCCCTGCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTc < 8:171629/148‑1 (MQ=255) tctcTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCAcc > 8:26892/1‑149 (MQ=255) gTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCa < 1:38139/149‑1 (MQ=255) ccaccaTCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGccccc > 6:238430/1‑149 (MQ=255) ccaccaTCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCAAAGGGATTCACCTCCTGGGCATCCTCCTGcccaac > 2:167858/1‑146 (MQ=255) accaTCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGt < 4:113494/149‑1 (MQ=255) ccaTCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTg > 4:136694/1‑149 (MQ=255) tcatcatcCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGc > 3:161474/1‑149 (MQ=255) tcCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCttt < 3:136694/149‑1 (MQ=255) ctcctTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTc > 2:296555/1‑98 (MQ=255) ctcctTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTc < 1:296555/98‑1 (MQ=255) tcctTTATATACCTTCACTATACCATCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTtata > 2:76501/1‑148 (MQ=255) ctTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATAc < 1:167858/149‑1 (MQ=255) tatataCCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATc > 7:16434/1‑149 (MQ=255) atataCCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATcc > 7:169052/1‑149 (MQ=255) tataCCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCt > 5:281388/1‑149 (MQ=255) ccTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCtcat < 8:16434/148‑1 (MQ=255) ttCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTcatcat > 2:82911/1‑149 (MQ=255) ttCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTcatcat > 2:306307/1‑149 (MQ=255) tataCCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGt > 8:82925/1‑148 (MQ=255) ccTCCCCCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTacct > 2:176818/1‑148 (MQ=255) ccTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTacctg > 6:71212/1‑149 (MQ=255) ccTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTacctg > 2:208942/1‑149 (MQ=255) ccTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTacct > 7:97810/1‑148 (MQ=255) aCCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTacctgacctg > 2:71695/1‑149 (MQ=255) ccGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGc < 5:71212/149‑1 (MQ=255) GGGCTCTATAGTGCCTCCTCCAGCAGCCTATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGTGATTCACCTCCTGGTCATCCTCCTGGCCCCCGTTGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATg > 1:76501‑M1/1‑149 (MQ=255) GGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATg > 7:26892‑M1/1‑149 (MQ=255) | CTCTCTTTATGGGGGGTAGGGGGGCTAACTGAGGTTTCCTAATGGTCTATCATGGAGATGCAGTCACTGATTCATCTCTAGTGGTCATTAAGTACCACCACCATCATCATCCCTCCTTTATATACCTTCACTATACCCTCCACCCGCAGGGCTCTATAGTGCCGCCTCCAGCAGCCAATGAGAGCCCCAATGCGCCTCATCAAGACTGTCCAAGGGATTCACCTCCTGGGCATCCTCCTGGCCCCCGTGGGCTTCTTTATATACATCCTCATCATGCGTTACCTGACCTGGCACATG > NC_002947/2621778‑2622074 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |