| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2653222 = | 29 (0.560) | 3 (0.060) | 3/244 | NT | 9.3% | coding (609/948 nt) | PP_2325 | 2‑dehydropantoate 2‑reductase |
| ? | NC_002947 | 2653271 = | 31 (0.640) | coding (658/948 nt) | PP_2325 | 2‑dehydropantoate 2‑reductase | |||||
TCACCTGGAACAAGTGCTCGGCATAGCCCGCGGGCAGTACATGGCCACAGGCTGCCGCCCCCTGCACCACCTCGGCCATCAAGGCCTGTATCAGCTCGCGACTATTGCTGTCGGCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACCGACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2653376‑2653222‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgacagcAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAG > NC_002947/2653271‑2653372 TCACCTGGAACAAGTGCTCGGCATAGCCCGCGGGCAGTACATGGCCACAGGCTGCCGCCCCCTGCACCACCTCGGCCATCAAGGCCTGTATCAGCTCGCGACTATTGCTGTCGGCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACC > 5:61638/1‑149 ACCTGGAACAAGTGCTCGGCATAGCCCGCGGGCAGTACATGGCCACAGGCTGCCGCCCCCTGCACCACCTCGGCCATCAAGGCCTGTATCAGCTCGCGACTATTGCTGTCGGCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACCGA < 1:196878/149‑1 GCGACTATTGCTGTCGGCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCC > 3:252888/1‑122 GCGACTATTGCTGTCGGCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCC < 4:252888/122‑1 TGTCGGCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAG > 7:128673/1‑149 ACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCA > 7:214284/1‑59 ACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCA < 8:214284/59‑1 TCACCTGGAACAAGTGCTCGGCATAGCCCGCGGGCAGTACATGGCCACAGGCTGCCGCCCCCTGCACCACCTCGGCCATCAAGGCCTGTATCAGCTCGCGACTATTGCTGTCGGCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACCGACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2653376‑2653222‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgacagcAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAG > NC_002947/2653271‑2653372 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |