New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2653222 =	29 (0.560)	3 (0.060)	3/244	NT	9.3%	coding (609/948 nt)	PP_2325	2‑dehydropantoate 2‑reductase
	?	NC_002947	2653271 =	31 (0.640)					coding (658/948 nt)	PP_2325	2‑dehydropantoate 2‑reductase

GTTGTTCCAGGCTGCGGGGATCGACTCGCAGGCCATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAGGTGACCGAGCGCATGCCCGACTACTGGCCGAG  >  NC_002947/2653129‑2653404                                                                                                                                               |                                                                                                                                      gttgttCCAGGCTGCGGGGATCGACTCGCAGGCCATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTc                                                                                                                                 >  7:62307/1‑149 (MQ=255)         aGGCTGCGGGGATCGACTCGCAGGCCATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCt                                                                                                                          >  3:179160/1‑148 (MQ=255)          ggCTGCGGGGATCGACTCGCAGGCCATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGa                                                                                                                        <  3:250232/149‑1 (MQ=255)                        aCTCGCAGGCCATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATg                                                                                                          >  6:61638/1‑149 (MQ=255)                              ggccacaggctgccgccccctgcaccacctcggccatcaaggcctgtatcagctcgcgactattGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTcgc                                                                                                                               >  3:252888‑M1/65‑122 (MQ=255)                              ggccacaggctgccgccccctgcaccacctcggccatcaaggcctgtatcagctcgcgactattGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTcgc                                                                                                                               <  4:252888‑M1/58‑1 (MQ=255)                                  cATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATATAGGCCTTGATGGCCGAggtgg                                                                                                >  6:167175/1‑149 (MQ=255)                                        gAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAgg                                                                                          >  6:263087/1‑149 (MQ=255)                                             tGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCAGTGATGGCCGACAGCAATAGTCGCGAGCGGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGggcg                                                                                     >  2:133206/1‑149 (MQ=255)                                               gCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATATAGGCCTTGATGGCCGAGGTGGTGCAGGGggcgg                                                                                    <  5:167175/148‑1 (MQ=255)                                                      cgcgcTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGTGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCtgt                                                                            <  4:179160/149‑1 (MQ=255)                                                             gCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCa                                                                       <  7:245391/147‑1 (MQ=255)                                                               aGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTa                                                                   <  5:263087/149‑1 (MQ=255)                                                                     tGGTGTGGAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGccc                                                             >  6:313449/1‑149 (MQ=255)                                                                     tGGTGTGGAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGccc                                                             >  4:174781/1‑149 (MQ=255)                                                                          tgGAACGTGCCTTACATCGGGCTGGCGGGGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACATCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCgg                                                         <  4:9205/148‑1 (MQ=255)                                                                            gAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCa                                                                       <  4:18998/132‑1 (MQ=255)                                                                            gAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCa                                                                       >  3:18998/1‑132 (MQ=255)                                                                            gAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGc                                                       >  5:238913/1‑148 (MQ=255)                                                                                   ccTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCgc                                               >  5:209154/1‑148 (MQ=255)                                                                                    cTTACAACGGGCTGGCGGTGCTGCGGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAg                                              <  6:193738/149‑1 (MQ=255)                                                                                     gcgactattgctgtcggccatcagtggcgaagtgctggcccccagcagcaccgacagcAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGcc                                                                        <  4:252888‑M2/64‑1 (MQ=255)                                                                                     gcgactattgctgtcggccatcagtggcgaagtgctggcccccagcagcaccgacagcAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGcc                                                                        >  3:252888‑M2/59‑122 (MQ=255)                                                                                         aaCGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACtt                                         >  4:120698/1‑149 (MQ=255)                                                                                           cGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGt                                       <  7:5039/149‑1 (MQ=255)                                                                                                tgtcggccatcagtggcgaagtgctggcccccagcagcaccgacagcAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAg                                  >  7:128673‑M2/48‑149 (MQ=255)                                                                                                  TCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAGGt                                <  1:196878‑M1/149‑1 (MQ=255)                                                                                                    GGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAGGTGa                              >  5:61638‑M1/1‑149 (MQ=255)                                                                                                          gctgGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAGGTGACCGAgc                        >  4:284098/1‑149 (MQ=255)                                                                                                           ctgGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAGGTGACCGAgcg                       >  1:235204/1‑149 (MQ=255)                                                                                                              ggggCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAGGTGACCGAgcgc                      <  3:120698/147‑1 (MQ=255)                                                                                                                 gCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAGGTGACCGAGCGCATGcc                 >  3:19674/1‑149 (MQ=255)                                                                                                                    atcaattCGCCACTGTTGGCCGAAATCAATAGTCGCGTTCTGATACAGGCCTTGATGGCCGCTGTGGTGCATGGGGCGGCATCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAGGTGACCGAGCGCATGCCCGa              <  6:209154/144‑1 (MQ=255)                                                                                                                       aCTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAGGTGACCGAGCGCATGCCCGacta           >  8:152685/1‑149 (MQ=255)                                                                                                                         ttCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAGGTGACCGAGCGCATGCCCGactact         <  8:62307/149‑1 (MQ=255)                                                                                                                           cGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAGGTGACCGAGCGCATGCCCGactact         <  6:238913/147‑1 (MQ=255)                                                                                                                                cTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAGGTGACCGAGCGCATGCCCGACTACTGGCCGAg  <  4:19674/149‑1 (MQ=255)                                                                                                                                 tGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAGGTGACCGAGCGCATGCCCGACTACTGGCCGAg  >  7:145585/1‑148 (MQ=255)                                                                                                                                          acagcAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCa                                                                                  >  7:214284‑M2/6‑59 (MQ=255)                                                                                                                                          acagcAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCa                                                                                  <  8:214284‑M2/54‑1 (MQ=255)                                                                                                                                               |                                                                                                                                      GTTGTTCCAGGCTGCGGGGATCGACTCGCAGGCCATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGGTGCTGCTGGGGGCCAGCACTTCGCCACTGATGGCCGACAGCAATAGTCGCGAGCTGATACAGGCCTTGATGGCCGAGGTGGTGCAGGGGGCGGCAGCCTGTGGCCATGTACTGCCCGCGGGCTATGCCGAGCACTTGTTCCAGGTGACCGAGCGCATGCCCGACTACTGGCCGAG  >  NC_002947/2653129‑2653404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.