| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3266247 = | 41 (0.790) | 3 (0.060) | 3/246 | NT | 6.8% | coding (267/372 nt) | PP_2864 | hypothetical protein |
| ? | NC_002947 | 3266291 = | 43 (0.880) | coding (223/372 nt) | PP_2864 | hypothetical protein | |||||
GCGGGTGCCGGGTTGTCGTTCAAGGTAGCCGACGAGCTGTTTCTGGGTTATTGCGATCGACCCGGGATACGGCCGGCGCCGTACCTGGCGCGGGCGCGGTGGGTCAGCATGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3266363‑3266247‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccgGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATCTTGTTTTCTGCCA > NC_002947/3266291‑3266398 GCGGGTGCCGGGTTGTCGTTCAAGGTAGCCGACGAGCTGTTTCTGGGTTATTGCGATCGACCCGGGATACGGCCGGCGCCGTACCTGGCGCGGGCGCGGTGGGTCAGCATGGCG < 1:321129/114‑1GCGGGTGCCGGGTTGTCGTTCAAGGTAGCCGACGAGCTGTTTCTGGGTTATTGCGATCGACCCGGGATACGGCCGGCGCCGTACCTGGCGCGGGCGCGGTGGGTCAGCATGGCG > 2:321129/1‑114 CCGGCGCCGTACCTGGCGCGGGCGCGGTGGGTCAGCATGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATCTTGTTTTCT > 2:40682/1‑149 CGGCGCCGTACCTGGCGCGGGCGCGGTGGGTCAGCATGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATCTTGTTTTCTG > 5:278963/1‑149 CGCCGTACCTGGCGCGGGCGCGGTGGGTCAGCATGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATCTTGTTTTCTGCCA < 1:40682/149‑1 GCGGGTGCCGGGTTGTCGTTCAAGGTAGCCGACGAGCTGTTTCTGGGTTATTGCGATCGACCCGGGATACGGCCGGCGCCGTACCTGGCGCGGGCGCGGTGGGTCAGCATGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3266363‑3266247‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccgGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATCTTGTTTTCTGCCA > NC_002947/3266291‑3266398 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |