New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3266247 = | 41 (0.790) | 3 (0.060) | 3/246 | NT | 6.8% | coding (267/372 nt) | PP_2864 | hypothetical protein |
? | NC_002947 | 3266291 = | 43 (0.880) | coding (223/372 nt) | PP_2864 | hypothetical protein |
GCGGGTGCCGGGTTGTCGTTCAAGGTAGCCGACGAGCTGTTTCTGGGTTATTGCGATCGACCCGGGATACGGCCGGCGCCGTACCTGGCGCGGGCGCGGTGGGTCAGCATGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3266363‑3266247 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccgGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATCTTGTTTTCTGCCA > NC_002947/3266291‑3266398 GCGGGTGCCGGGTTGTCGTTCAAGGTAGCCGACGAGCTGTTTCTGGGTTATTGCGATCGACCCGGGATACGGCCGGCGCCGTACCTGGCGCGGGCGCGGTGGGTCAGCATGGCG < 1:321129/114‑1 GCGGGTGCCGGGTTGTCGTTCAAGGTAGCCGACGAGCTGTTTCTGGGTTATTGCGATCGACCCGGGATACGGCCGGCGCCGTACCTGGCGCGGGCGCGGTGGGTCAGCATGGCG > 2:321129/1‑114 CCGGCGCCGTACCTGGCGCGGGCGCGGTGGGTCAGCATGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATCTTGTTTTCT > 2:40682/1‑149 CGGCGCCGTACCTGGCGCGGGCGCGGTGGGTCAGCATGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATCTTGTTTTCTG > 5:278963/1‑149 CGCCGTACCTGGCGCGGGCGCGGTGGGTCAGCATGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATCTTGTTTTCTGCCA < 1:40682/149‑1 GCGGGTGCCGGGTTGTCGTTCAAGGTAGCCGACGAGCTGTTTCTGGGTTATTGCGATCGACCCGGGATACGGCCGGCGCCGTACCTGGCGCGGGCGCGGTGGGTCAGCATGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3266363‑3266247 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccgGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATCTTGTTTTCTGCCA > NC_002947/3266291‑3266398 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |