New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3266247 =	41 (0.790)	3 (0.060)	3/246	NT	6.8%	coding (267/372 nt)	PP_2864	hypothetical protein
	?	NC_002947	3266291 =	43 (0.880)					coding (223/372 nt)	PP_2864	hypothetical protein

GCCTCTTCGCGGGTAAAGCCGCGAAAGGGCCGGAACAGGTCGATCACATGACCAACCCCACCTGCAACCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATCTTG  >  NC_002947/3266099‑3266388                                                                                                                                                     |                                                                                                                                              gccctttCGCGGCTTTACCCGCGAAGAGGCCGGTACAGGTCGATCACATGACCAACCCCACCTGCAACCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGggc                                                                                                                                               >  6:16345/6‑149 (MQ=38)            ggTAAAGCCGCGAAAGGGCCGGAACAGGTCGATCACATGACCAACCCCACCTGCAACCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCt                                                                                                                                    <  6:112072/149‑1 (MQ=255)                 aGCCGCGAAAGGGCCGGAACAGGTCGATCACATGACCAACCCCACCTGCAACCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGAcc                                                                                                                                >  2:163688/1‑148 (MQ=255)                  gCCGCGAAAGGGCCGGAACAGGTCGATCACATGACCAACCCCACCTGCAACCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCa                                                                                                                              >  7:167605/1‑149 (MQ=255)                                ggAACAGGTCGATCACATGACCAACCCCACCTGCAACCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCAccgcgcccgcgc                                                                                                                  >  7:175733/1‑147 (MQ=255)                                         tggcagaaaacaagatgttcgcggtgctcgacctggcgggtgccgggttgtcgttcaaggtagccgacgagctgtttctgggttattgcgatcgacccgggatacggcCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGgcg                                                                                                       <  1:40682‑M1/41‑1 (MQ=255)                                           aTCACATGACCAACCCCACCTGCAACCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCgcc                                                                                                     >  4:7102/1‑149 (MQ=255)                                            cagaaaacaagatgttcgcggtgctcgacctggcgggtgccgggttgtcgttcaaggtagccgacgagctgtttctgggttattgcgatcgacccgggatacggcCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCgccg                                                                                                    >  5:278963‑M1/106‑149 (MQ=255)                                             agaaaacaagatgttcgcggtgctcgacctggcgggtgccgggttgtcgttcaaggtagccgacgagctgtttctgggttattgcgatcgacccgggatacggcCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCgccgg                                                                                                   >  2:40682‑M1/105‑149 (MQ=255)                                                aTGACCAACCCCACCTGCAACCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCgccggccg                                                                                                >  7:176212/1‑149 (MQ=255)                                                aTGACCAACCCCACCTGCAACCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCgccggccg                                                                                                >  7:170797/1‑149 (MQ=255)                                                aTGACCAACCCCACCTGCAACCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTGCATCACGCCCCATGGGGTAGGGCGGCACCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCgccggccg                                                                                                >  4:54878/1‑149 (MQ=255)                                                      aaCCCCACCTGCAACCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATccc                                                                                          <  3:7102/149‑1 (MQ=255)                                                      aaCCCCACCTGCAACCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATccc                                                                                          >  5:233280/1‑149 (MQ=255)                                                        ccccACCTGCAACCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCgg                                                                                        <  8:167605/149‑1 (MQ=255)                                                                gCAACCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCg                                                                                         <  6:335068/140‑1 (MQ=255)                                                                gCAACCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCg                                                                                         >  5:335068/1‑140 (MQ=255)                                                                   aCCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCaa                                                                             <  8:170797/149‑1 (MQ=255)                                                                          gggCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAAcc                                                                        <  1:163688/147‑1 (MQ=255)                                                                                       aCTACCAGCTGGTGCGACCGCTGCAACACCTAACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCAGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACACCtcgac                                                         >  3:98085/1‑147 (MQ=255)                                                                                                tGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCtt                                                >  3:130974/1‑149 (MQ=255)                                                                                                    gCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAAc                                            <  8:175733/149‑1 (MQ=255)                                                                                                     cGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAAc                                            <  8:176212/148‑1 (MQ=255)                                                                                                       aCCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGGCGGCTCCCTTGAACgc                                          >  4:10907/1‑147 (MQ=255)                                                                                                                       acacaGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGc                           >  6:168203/1‑147 (MQ=255)                                                                                                                        cacaGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAg                        >  6:190307/1‑149 (MQ=255)                                                                                                                         acaGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCgccggc                                                                                                  <  8:166159/74‑1 (MQ=255)                                                                                                                         acaGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCgccggc                                                                                                  >  7:166159/1‑74 (MQ=255)                                                                                                                         acaGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAgg                       <  4:130974/149‑1 (MQ=255)                                                                                                                           aGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTc                     >  5:322873/1‑149 (MQ=255)                                                                                                                             ttCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCa                                                                      >  3:175269/1‑98 (MQ=255)                                                                                                                             ttCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCa                                                                      <  4:175269/98‑1 (MQ=255)                                                                                                                              tcatcaCGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAg                  >  3:149839/1‑149 (MQ=255)                                                                                                                                atcaCGACCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACTGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCACAAACAGCTCGTCGGCAACCATGAACGAAAACCCCGCACCCCCCAGGTCGAACa                >  8:124252/1‑149 (MQ=255)                                                                                                                                 tcaCGCCCCATGTGGTAGGGCGGCGCCATGCTGACCCACCGCGCACGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCAc               >  8:134149/1‑149 (MQ=255)                                                                                                                                 tcaCGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCAc               >  8:182267/1‑149 (MQ=255)                                                                                                                                    cGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACcgc            <  5:16345/149‑1 (MQ=255)                                                                                                                                     gCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCg                                                                                <  4:274417/80‑1 (MQ=255)                                                                                                                                     gCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCg                                                                                >  3:274417/1‑80 (MQ=255)                                                                                                                                     gCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCAGTATCCAGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACcgc            >  1:218243/1‑148 (MQ=255)                                                                                                                                           tGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATc     <  6:233280/149‑1 (MQ=255)                                                                                                                                           tGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATc     <  5:168203/149‑1 (MQ=255)                                                                                                                                             gggTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATCtt   <  7:182267/149‑1 (MQ=255)                                                                                                                                             gggTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATCtt   <  4:149839/149‑1 (MQ=255)                                                                                                                                              ggTAGGGCGGCACCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATCTTg  <  3:54878/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                              GCCTCTTCGCGGGTAAAGCCGCGAAAGGGCCGGAACAGGTCGATCACATGACCAACCCCACCTGCAACCGCTTGGGCAACCGACGCACTACCAGCTGGTGCGACCGCTGCAACACCTCACACAGTTCATCACGCCCCATGGGGTAGGGCGGCGCCATGCTGACCCACCGCGCCCGCGCCAGGTACGGCGCCGGCCGTATCCCGGGTCGATCGCAATAACCCAGAAACAGCTCGTCGGCTACCTTGAACGACAACCCGGCACCCGCCAGGTCGAGCACCGCGAACATCTTG  >  NC_002947/3266099‑3266388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.