New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3393834 = | 37 (0.720) | 3 (0.060) | 3/252 | NT | 7.9% | coding (573/900 nt) | PP_2997 | protein CnmA |
? | NC_002947 | 3393867 = | 34 (0.680) | coding (540/900 nt) | PP_2997 | protein CnmA |
CAGCATCCGCGCCTGGGCGATGGCATGAGCCTGGAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3393872‑3393834 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggATGCTGCGGGTTGCTCAGGCACACCCAGTCCTGCTCGAACAGCACCTGTTGATACATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATT > NC_002947/3393867‑3393976 CAGCATCCGCGCCTGGGCGATGGCATGAGCCTGGAGCGGATGCTGCGGGTTGCTCAGGCACACCCAGTCCTGCTCGAACAGCACCTGTTGATACATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATT > 7:302522/1‑149 GCGCCTGGGCGATGGCATGAGCCTGGAGCGGATGCTGCGGGTTGCTCAGGCACACCCAGTCCTGCTCGAACAGCACCTGTTGATACATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAG > 7:93800/1‑124 GCGCCTGGGCGATGGCATGAGCCTGGAGCGGATGCTGCGGGTTGCTCAGGCACACCCAGTCCTGCTCGAACAGCACCTGTTGATACATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAG < 8:93800/124‑1 CAGCATCCGCGCCTGGGCGATGGCATGAGCCTGGAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3393872‑3393834 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggATGCTGCGGGTTGCTCAGGCACACCCAGTCCTGCTCGAACAGCACCTGTTGATACATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATT > NC_002947/3393867‑3393976 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |