| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3433578 = | 42 (0.810) | 4 (0.080) | 4/248 | NT | 8.4% | coding (257/531 nt) | PP_3050 | hypothetical protein |
| ? | NC_002947 | 3433622 = | 47 (0.950) | coding (301/531 nt) | PP_3050 | hypothetical protein | |||||
AGTCCACTCGACCACCCAGACCGCAAAGCCGTCCAGCTCTGGCCTGCTCCAATCGCGCTCGGCGCGTACGAACTCAGCGAACCTCACCGGCAGGCCCCACGACTGCATGCGGAGCAGCACAGCCAACTGAGCGGCGACAAATGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3433723‑3433578‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcagTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACT > NC_002947/3433622‑3433723 AGTCCACTCGACCACCCAGACCGCAAAGCCGTCCAGCTCTGGCCTGCTCCAATCGCGCTCGGCGCGTACGAACTCAGCGAACCTCACCGGCAGGCCCCACGACTGCATGCGGAGCAGCACAGCCAACTGAGCGGCGACAAATGCA < 6:250852/145‑1 ACTCGACCACCCAGACCGCAAAGCCGTCCAGCTCTGGCCTGCTCCAATCGCGCTCGGCGCGTACGAACTCAGCGAACCTCACCGGCAGGCCCCACGACTGCATGCGGAGCAGCACAGCCAACTGAGCGGCGACAAATG > 1:111081/1‑138 ACTCGACCACCCAGACCGCAAAGCCGTCCAGCTCTGGCCTGCTCCAATCGCGCTCGGCGCGTACGAACTCAGCGAACCTCACCGGCAGGCCCCACGACTGCATGCGGAGCAGCACAGCCAACTGAGCGGCGACAAATG < 2:111081/138‑1 CCAGACCGCAAAGCCGTCCAGCTCTGGCCTGCTCCAATCGCGCTCGGCGCGTACGAACTCAGCGAACCTCACCGGCAGGCCCCACGACTGCATGCGGAGCAGCACAGCCAACTGAGCGGCGACAAATGCA < 7:185078/130‑1 CCAGACCGCAAAGCCGTCCAGCTCTGGCCTGCTCCAATCGCGCTCGGCGCGTACGAACTCAGCGAACCTCACCGGCAGGCCCCACGACTGCATGCGGAGCAGCACAGCCAACTGAGCGGCGACAAATGCA > 8:185078/1‑130 CCCCACGACTGCATGCGGAGCAGCACAGCCAACTGAGCGGCGACAAATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGT > 8:222166/1‑149 CCACGACTGCATGCGGAGCAGCACAGCCAACTGAGCGGCGACAAATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTG > 7:62945/1‑129 CCACGACTGCATGCGGAGCAGCACAGCCAACTGAGCGGCGACAAATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTG < 8:62945/129‑1 CTGCATGCGGAGCAGCACAGCCAACTGAGCGGCGACAAATGCAGTCGTGGGGCCTGCCGGTCAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACT > 3:86736/1‑146 AGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCA > 3:48137/1‑65 AGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCA < 4:48137/65‑1 AGTCCACTCGACCACCCAGACCGCAAAGCCGTCCAGCTCTGGCCTGCTCCAATCGCGCTCGGCGCGTACGAACTCAGCGAACCTCACCGGCAGGCCCCACGACTGCATGCGGAGCAGCACAGCCAACTGAGCGGCGACAAATGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3433723‑3433578‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcagTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACT > NC_002947/3433622‑3433723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |