New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3433578 =42 (0.810)4 (0.080) 4/248 NT 8.4% coding (257/531 nt) PP_3050 hypothetical protein
?NC_002947 3433622 = 47 (0.950)coding (301/531 nt) PP_3050 hypothetical protein

TGCCGAAGAAGACCCAGGCACGGGGCAGACGGCGGTCGATGCGCGTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACTCAGATCATCTACTTGGGCGAGGAGGAGTGGCCGTGGC  >  NC_002947/3433480‑3433760
                                                                                                                                               |                                                                                                                                          
tGCCGAAGAAGACCCAGGCACGGGGCAGACGGCGGTCGATGCGCGTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTggg                                                                                                                                      <  1:174219/149‑1 (MQ=255)
tGCCGAAGAAGACCCAGGCACGGGGCAGACGGCGGTCGATGCGCGTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTggg                                                                                                                                      <  6:160286/149‑1 (MQ=255)
 gCCGAAGAAGACCCAGGCACGGGGCAGACGGCGGTCGATGCGCGTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTggg                                                                                                                                      <  3:70830/148‑1 (MQ=255)
  actcgaccacccagaccgcaaagccgtccagctctggcctgctccaatcgcgctcggcgcgtacgaactcagcgaacctcaccggcaggccccacgaCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTgggg                                                                                                                                     >  8:222166‑M1/98‑149 (MQ=255)
            cccAGGCACGGGGCAGACGGCGGTCGATGCGCGTTTTGAAGCGCGCGTGCTGGTAACCGGGGGAGGAAGATAAGTGATTGCACATAGATGCATTTGTCGCCGCTCAGTTGGCTGTGCTGATCCGCTTGCAGTCGTGGGGCCTGCCGGt                                                                                                                            >  1:86125/1‑148 (MQ=255)
            cccAGCCACGGCGCAGACGGCGTTCGATGCGCGTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGa                                                                                                                          <  4:13894/149‑1 (MQ=255)
             ccAGGCACGGGGCAGACGGCGGTCGATGCGCGTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAg                                                                                                                         >  6:255039/1‑149 (MQ=255)
             ccAGGCACGGGCAGACGGCGGTCGATGCGCGTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAgg                                                                                                                        >  6:38855/1‑149 (MQ=255)
              cAGGCACGGGGCAGACGGCGGTCGATGCGCGTTTTGAAGCGCGCGTGCTGGTACCGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGt                                                                                                                       >  4:63432/1‑149 (MQ=255)
                   aCGGGGCAGACGGCGGTCGATGCGCGTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGc                                                                                                                   <  1:209113/149‑1 (MQ=255)
                    caaagccgtccagctctggcctgctccaatcgcgctcggcgcgtacgaactcagcgaacctcaccggcaggccccacgaCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTgg                                                                                                                                       <  8:62945‑M1/50‑1 (MQ=255)
                    caaagccgtccagctctggcctgctccaatcgcgctcggcgcgtacgaactcagcgaacctcaccggcaggccccacgaCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTgg                                                                                                                                       >  7:62945‑M1/80‑129 (MQ=255)
                      gggCAGACGGCGGTCGATGCGCGTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGa                                                                                                                <  1:104782/149‑1 (MQ=255)
                      gggCAGACGGCGGTCGATGCGCGTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGa                                                                                                                <  5:38855/149‑1 (MQ=255)
                      gggCAGACGGCGGTCGATGCGCGTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGa                                                                                                                <  1:62642/149‑1 (MQ=255)
                          aGACGGCGGTCGATGCGCGTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGGCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTc                                                                                                            <  3:10240/149‑1 (MQ=255)
                                      aTGCGCGTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAg                                                                                                >  6:54743/1‑149 (MQ=255)
                                       tGCGCGTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAgc                                                                                               <  1:273955/149‑1 (MQ=255)
                                          gcgTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGc                                                                                                                   >  2:272371/1‑126 (MQ=255)
                                          gcgTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGc                                                                                                                   <  1:272371/126‑1 (MQ=255)
                                             ttttGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGAtt                                                                                         <  2:207952/149‑1 (MQ=255)
                                             ttttGAAGCGCGCGTGCTGGTACCGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTg                                                                                        <  3:63432/149‑1 (MQ=255)
                                                 gAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAg                                                                                     >  4:139085/1‑149 (MQ=255)
                                                  aaGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCAGATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAg                                                                                     <  2:86125/148‑1 (MQ=255)
                                                      gcgcgTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGc                                                                                <  6:170892/149‑1 (MQ=255)
                                                                gTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGa                                                                      >  4:295480/1‑149 (MQ=255)
                                                                      gggggAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCt                                                                 >  5:223777/1‑149 (MQ=255)
                                                                         ggaggaAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTg                                                              <  2:39253/149‑1 (MQ=255)
                                                                          gaggaAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGc                                                             <  3:295480/149‑1 (MQ=255)
                                                                                      tGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCttt                                                               >  7:182779/1‑135 (MQ=255)
                                                                                      tGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCttt                                                               <  8:182779/135‑1 (MQ=255)
                                                                                        cTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTc                                                >  1:8105/1‑148 (MQ=255)
                                                                                         ttGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTc                                                >  2:46395/1‑147 (MQ=255)
                                                                                           ccccacgactgcatgcggagcagcacagccaactgagcggcgacaaatgcagTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGt                                            >  8:222166‑M2/53‑149 (MQ=255)
                                                                                             ccacgactgcatgcggagcagcacagccaactgagcggcgacaaatgcagTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTg                                                              >  7:62945‑M2/51‑129 (MQ=255)
                                                                                             ccacgactgcatgcggagcagcacagccaactgagcggcgacaaatgcagTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTg                                                              <  8:62945‑M2/79‑1 (MQ=255)
                                                                                              caTAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGa                                         <  5:54743/149‑1 (MQ=255)
                                                                                                   ctgcatgcggagcagcacagccaactgagcggcgacaaatgcagTCGTGGGGCCTGCCGGTCAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACt                                       >  3:86736‑M2/45‑146 (MQ=255)
                                                                                                    TGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTgg                                                      >  8:185078‑M1/1‑130 (MQ=255)
                                                                                                    TGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTgg                                                      <  7:185078‑M1/130‑1 (MQ=255)
                                                                                                    TGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACt                                       <  6:250852‑M1/145‑1 (MQ=255)
                                                                                                      CATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGt                                            >  1:111081‑M1/1‑138 (MQ=255)
                                                                                                      CATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGt                                            <  2:111081‑M1/138‑1 (MQ=255)
                                                                                                           gTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACTCAGATCATCt                             <  5:255039/148‑1 (MQ=255)
                                                                                                              gccgcTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACgcgc                                                                                                    <  1:125814/74‑1 (MQ=255)
                                                                                                              gccgcTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACgcgc                                                                                                    >  2:125814/1‑74 (MQ=255)
                                                                                                              gccgcTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACTCAGATCATCTACtt                         >  2:67458/1‑149 (MQ=255)
                                                                                                                cgcTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACTCAGATCATCTACTTgg                       >  4:137508/1‑149 (MQ=255)
                                                                                                                cgcTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACTCAGATCATCTACTTgg                       >  1:303086/1‑149 (MQ=255)
                                                                                                                cgcTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACTCAGATCATCTACTTgg                       <  5:250852/149‑1 (MQ=255)
                                                                                                                 gcTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCt                                                                 >  7:18710/1‑106 (MQ=255)
                                                                                                                 gcTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCt                                                                 <  8:18710/106‑1 (MQ=255)
                                                                                                                 gcTCAGTGGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACTCAGATCATCTACTTggg                      <  4:149352/149‑1 (MQ=255)
                                                                                                                  cTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACTCAGATCATCTACTTGGGc                     <  1:46395/149‑1 (MQ=255)
                                                                                                                            tgtgCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGa                                              >  2:330747/1‑114 (MQ=255)
                                                                                                                            tgtgCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGa                                              <  1:330747/114‑1 (MQ=255)
                                                                                                                                ctgctCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACTCAGATCATCTACTTGGGCGAGGAGGAgtggcc       <  1:67458/149‑1 (MQ=255)
                                                                                                                                 tgctCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACTCAGATCATCTACTTGGGCGAGGAGGAgtggccg      >  7:257685/1‑149 (MQ=255)
                                                                                                                                 tgctCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACTCAGATCATCTACTTGGGCGAGGAGGAgtggccg      >  6:232443/1‑149 (MQ=255)
                                                                                                                                     ccGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACTCAGATCATCTACTTGGGCGAGGAGGAgtggccgtggc  >  8:249377/1‑149 (MQ=255)
                                                                                                                                             agTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCa                                                                              >  3:48137‑M2/3‑65 (MQ=255)
                                                                                                                                             agTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCa                                                                              <  4:48137‑M2/63‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                          
TGCCGAAGAAGACCCAGGCACGGGGCAGACGGCGGTCGATGCGCGTTTTGAAGCGCGCGTGCTGGTACCGGGGGAGGAAGATAACTGCTTGCACATAGCTGCATTTGTCGCCGCTCAGTTGGCTGTGCTGCTCCGCATGCAGTCGTGGGGCCTGCCGGTGAGGTTCGCTGAGTTCGTACGCGCCGAGCGCGATTGGAGCAGGCCAGAGCTGGACGGCTTTGCGGTCTGGGTGGTCGAGTGGACTCAGATCATCTACTTGGGCGAGGAGGAGTGGCCGTGGC  >  NC_002947/3433480‑3433760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.