New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3471591 =	53 (1.030)	5 (0.100)	4/248	NT	9.9%	coding (941/2460 nt)	PP_3084	ferric siderophore receptor
	?	NC_002947	3471661 =	40 (0.810)					coding (871/2460 nt)	PP_3084	ferric siderophore receptor

GTAGCGGCATCGGAGGGGCGATCAACCTGGTGCCCAAGCGTGCCGAAGATAGCGCCACGCGGCATGTCACCCTCGACTACGCCACGGGCGACAACGTGGGTGGCCACCTCGACCTGGGCCAGCGTTTTGGTGAAGACAACCGTTTTGGCGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3471744‑3471591 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgTGGCGTAGTCGAGGGTGACATGCCGCGTGGCGCTATCTTCGGCACGCTTGGGCACCAGGTTGATCGCCCCTCCGATGCCGCTACCCTGTGGCGCGACCCCATTGAGAAAAGCACTGGAACCCTTGAATACTTCGACCCGCTCGAGT  >  NC_002947/3471661‑3471806                                                                                                                                                                                                                                                                                                              GTAGCGGCATCGGAGGGGCGATCAACCTGGTGCCCAAGCGTGCCGAAGATAGCGCCACGCGGCATGTCACCCTCGACTACGCCACGGGCGACAACGTGGGTGGCCACCTCGACCTGGGCCAGCGTTTTGGTGAAGACAACCGTTTTGGC                                                                                                                                                         >  1:165361/1‑149  TAGCGGCATCGGAGGGGCGATCAACCTGGTGCCCAAGCGTGCCGAAGATAGCGCCACGCGGCATGTCACCCTCGACTACGCCACGGGCGACAACGTGGGTGGCCACCTCGACCTGGGCCAGCGTTTTGGTGAAGACAACCGTTTTGGCG                                                                                                                                                        >  4:145425/1‑149                                                                                 GCCACGGGCGACAACGTGGGTGGCCACCTCGACCTGGGCCAGCGTTTTGGTGAAGACAACCGTTTTGGCGCCCGTGGCGTAGTCGAGGGTGACATGCCGCGTGGCGCTATCTTCGGCACGCTTGGGCACCAGGTTGATCGCCCCTCCGA                                                                         >  1:177669/1‑149                                                                                 GCCACGGGCGACAACGTGGGTGGCCACCTCGACCTGGGCCAGCGTTTTGGTGAAGACAACCGTTTTGGCGCCCGTGGCGTAGTCGAGGGTGACATGCCGCGTGGCGCTATCTTCGGCACGCTTGGGCACCAGGTTGATCGCCCCT                                                                             >  8:82465/1‑145                                                                                   CACGGGCGACAACGTGGGTGGCCACCTCGACCTGGGCCAGCGTTTTGGTGAAGACAACCGTTTTGGCGCCCGTGGCGTAGTCGAGGGTGACATGCCGCGTGGCGCTATCTTCGGCACGCTTGGGCACCAGGTTGATCGCCCCTCCGATG                                                                       >  7:140175/1‑149                                                                                                 TGGGTGGCCACCTCGACCTGGGCCAGCGTTTTGGTGAAGACAACCGTTTTGGCGCCCGTGGCGTAGTCGAGGGTGACATGCCGCGTGGCGCTATCTTCGGCACGCTTGGGCACCAGGTTGATCGCCCCTCCGATGCCGCTACCCTGTGG                                                         <  7:82465/149‑1                                                                                                                          GCGTTTTGGTGAAGACAACCGTTTTGGCGCCCGTGGCGTAGTCGAGGGTGACATGCCGCGTGGCGCTATCTTCGGCACGCTTGGGCACCAGGTTGATCGCCCCTCCGATGCCGCTACCCTGTGGCGCGACCCCATTGAGAAAAGCACTG                                <  2:177669/149‑1                                                                                                                                                        CCGTGGCGTAGTCGAGGGTGACATGCCGCGTGGCGCTATCTTCGGCACGCTTGGGCACCAGGTTGATCGCCCCTCCGATGCCGCTACCCTGTGGCGCGACCCCATTGAGAAAAGCACTGGAACCCTTGAATACTTCGACCCGCTCGAGT  <  1:214086/149‑1                                                                                                                                                          GTGGCGTAGTCGAGGGTGACATGCCGCGTGGCGCTATCTTCGGCACGCTTGGGCACCAGGTTGATCGCCCCTCCGATGCCGCTACC                                                               >  3:219426/1‑86                                                                                                                                                          GTGGCGTAGTCGAGGGTGACATGCCGCGTGGCGCTATCTTCGGCACGCTTGGGCACCAGGTTGATCGCCCCTCCGATGCCGCTACC                                                               <  4:219426/86‑1                                                                                                                                                                                                                                                                                                              GTAGCGGCATCGGAGGGGCGATCAACCTGGTGCCCAAGCGTGCCGAAGATAGCGCCACGCGGCATGTCACCCTCGACTACGCCACGGGCGACAACGTGGGTGGCCACCTCGACCTGGGCCAGCGTTTTGGTGAAGACAACCGTTTTGGCGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3471744‑3471591 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgTGGCGTAGTCGAGGGTGACATGCCGCGTGGCGCTATCTTCGGCACGCTTGGGCACCAGGTTGATCGCCCCTCCGATGCCGCTACCCTGTGGCGCGACCCCATTGAGAAAAGCACTGGAACCCTTGAATACTTCGACCCGCTCGAGT  >  NC_002947/3471661‑3471806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.