| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3597423 = | 44 (0.850) | 4 (0.080) | 4/252 | NT | 8.4% | coding (689/1011 nt) | PP_3174 | oxidoreductase |
| ? | NC_002947 | 3597463 = | 45 (0.900) | coding (649/1011 nt) | PP_3174 | oxidoreductase | |||||
ACATCGTCAACCGCCAGGCCGAGCCCGAACAGCTCACGGCCGCCGCCGCCCATGGTCTGGGCGTCGTACCCTTCAGCCCGCTGGCCCGGGGCGTGCTCAGTGGCAAGTATGCGCCGGGCGCGGTGCCGGAAGCCGGTAGCCGAGCAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3597573‑3597423‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGATGTT > NC_002947/3597463‑3597574 ACATCGTCAACCGCCAGGCCGAGCCCGAACAGCTCACGGCCGCCGCCGCCCATGGTCTGGGCGTCGTACCCTTCAGCCCGCTGGCCCGGGGCGTGCTCAGTGGCAAGTATGCGCCGGGCGCGGTGCCGGAAGCCGGTAGCCGAGCAGGG > 4:83200/1‑149 CATCGTCAACCGCCAGGCCGAGCCCGAACAGCTCACGGCCGCCGCCGCCCATGGTCTGGGCGTCGTACCCTTCAGCCCGCTGGCCCGGGGCGTGCTCAGTGGCAAGTATGCGCCGGGCGCGGTGCCGGAAGCCGGTAGCCGAGCAGGGC > 4:111258/1‑149 CATCGTCAACCGCCAGGCCGAGCCCGAACAGCTCACGGCCGCCGCCGCCCATGGTCTGGGCGTCGTACCCTTCAGCCCGCTGGCCCGGGGCGTGCTCAGTGGCAAGTATGCGCCGGGAGCCGTGCAGGAAGCCGGTAGCCGAGCAGGGC > 2:100378/1‑149 ATCGTCAACCGCCAGGCCGAGCCCGAACAGCTCACGGCCGCCGCCGCCCATGGTCTGGGCGTCGTACCCTTCAGCCCGCTGGCCCGGGGCGTGCTCAGTGGCAAGTATGCGCCGGGCGCGGTGCCGGAAGCCGGTAGCCGAGCAGGGCG > 7:202579/1‑149 CCGGGCGCGGTGCCGGAAGCCGGTAGCCGAGCAGGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGATGT > 6:220199/1‑149 CGGGCGCGGTGCCGGAAGCCGGTAGCCGAGCAGGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGATGTT < 5:220199/149‑1 CGGGCGCGGTGCCGGAAGCCGGTAGCCGAGCAGGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGT > 5:17724/1‑139 CGGGCGCGGTGCCGGAAGCCGGTAGCCGAGCAGGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGT < 6:17724/139‑1 ACATCGTCAACCGCCAGGCCGAGCCCGAACAGCTCACGGCCGCCGCCGCCCATGGTCTGGGCGTCGTACCCTTCAGCCCGCTGGCCCGGGGCGTGCTCAGTGGCAAGTATGCGCCGGGCGCGGTGCCGGAAGCCGGTAGCCGAGCAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3597573‑3597423‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGATGTT > NC_002947/3597463‑3597574 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |