New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3597423 =	44 (0.850)	4 (0.080)	4/252	NT	8.4%	coding (689/1011 nt)	PP_3174	oxidoreductase
	?	NC_002947	3597463 =	45 (0.900)					coding (649/1011 nt)	PP_3174	oxidoreductase

CGACAATGCCCACCCCCTTGGCCTCTGCATACGTCTGAATCTGCC‑GGGCAATGGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGATGTTGTACAGCGGCTGGCTGACTATCGGCCT  >  NC_002947/3597322‑3597601                                                                                                                                               |                                                                                                                                           cGACAATGCCCACCCCCTTGGCCTCTGCATACGTCTGAATCTGCC‑GGGCAATGGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACtt                                                                                                                                      <  4:74957/148‑1 (MQ=255)  gACAATGCCCACCCCCTTGGCCTCTGCATACGTCTGAATCTGCCGGGGCAATGGTCAGCGACTCATGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTg                                                                                                                                     >  1:68904/1‑149 (MQ=255)     aaTGCCCACCCCCTTGGCCTCTGCATACGTCTGAATCTGCC‑GGGCAATGGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCAc                                                                                                                                 <  7:102006/149‑1 (MQ=255)                            cATACGTCTGAATCTGCC‑GGGCAATTGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCgg                                                                                                           <  6:81445/148‑1 (MQ=255)                            cATACGTCTGAATCTGCC‑GGGCAATGGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGc                                                                                                             <  5:170487/146‑1 (MQ=255)                            cATACGTCTGAATCTGCC‑GGGCAATGGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGc                                                                                                             <  8:65688/146‑1 (MQ=255)                            cATACGTCTGAATCTGCC‑GGGCAATGGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCggg                                                                                                          >  8:107230/1‑149 (MQ=255)                                   cTGAATCTGCC‑GGGCAATGGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAgg                                                                                                   >  5:289214/1‑149 (MQ=255)                                      aaTCTGCC‑TGGCAATGGGCAGCGACTCCTTGCGCAACTACACTTCCATGATTCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCTGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAgg                                                                                                   <  8:300567/146‑1 (MQ=255)                                      aaTCTGCC‑GGGCAATGGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAgg                                                                                                   <  7:107230/146‑1 (MQ=255)                                      aaTCTGCC‑GGGCAATGGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTa                                                                                                <  5:116101/149‑1 (MQ=255)                                       aTCTGCC‑GGGCAATGGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTac                                                                                               >  8:202579/1‑149 (MQ=255)                                            cc‑GGGCAATGGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTacgac                                                                                            <  5:251890/147‑1 (MQ=255)                                            cc‑GGGCAATGGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGc                                                                                          >  3:92457/1‑149 (MQ=255)                                             c‑GGGCAATGGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGcc                                                                                         >  1:100378/1‑149 (MQ=255)                                               gggCAATGGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGcc                                                                                         >  7:28599/1‑148 (MQ=255)                                                   aaTGGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGAc                                                                                    >  1:199501/1‑149 (MQ=255)                                                        tCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCt                                                                                                        >  7:32158/1‑124 (MQ=255)                                                        tCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCt                                                                                                        <  8:32158/124‑1 (MQ=255)                                                        tCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATgg                                                                               <  1:112043/149‑1 (MQ=255)                                                            cGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGggcgg                                                                           >  7:20343/1‑149 (MQ=255)                                                                tCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGggcggcggc                                                                       >  3:83200/1‑149 (MQ=255)                                                                  cTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGggcggcggcgg                                                                     >  5:258448/1‑149 (MQ=255)                                                                  cTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGggcggcggcgg                                                                     <  6:258448/149‑1 (MQ=255)                                                                       gcCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGt                                                                 >  8:308673/1‑148 (MQ=255)                                                                        ccactccactTCCTTGATGCGTTTGTCGTGCGGCCCTGCTCGTCTACCGGATTCCGGCACCGCGCCCGGCGCATACTTGCCACTGCGCACGCCCCGGGCCAGGGGGCTGAAGGGTACGTCGCCCAGACCATGGGCGGGGGCGGCCGTGa                                                               <  8:28599/149‑1 (MQ=255)                                                                         cactccactTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAg                                                              <  2:199501/149‑1 (MQ=255)                                                                         cactccactTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAg                                                              >  6:62513/1‑149 (MQ=255)                                                                          actccactTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGc                                                             >  1:273927/1‑149 (MQ=255)                                                                                   ccATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCgg                                                      <  7:308673/147‑1 (MQ=255)                                                                                   ccATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGc                                                    >  5:135733/1‑149 (MQ=255)                                                                                      tgatgCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCg                                                 <  6:135733/149‑1 (MQ=255)                                                                                           cGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCt                                             <  8:20343/148‑1 (MQ=255)                                                                                                  ccTGCCGCCCCGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGTTGAAGGGTACGACGcc                                                                                         <  4:164830/97‑1 (MQ=255)                                                                                                  ccTGCCGCCCCGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGTTGAAGGGTACGACGcc                                                                                         >  3:164830/1‑97 (MQ=255)                                                                                                   cTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGa                                    <  5:62513/149‑1 (MQ=255)                                                                                                    tGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGAc                                   >  6:43281/1‑149 (MQ=255)                                                                                                       CGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGAt                                >  7:202579‑M1/1‑149 (MQ=255)                                                                                                        GCCCTGCTCGGCTACCGGCTTCCTGCACGGCTCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGATg                               >  2:100378‑M1/1‑149 (MQ=255)                                                                                                        GCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGATg                               >  4:111258‑M1/1‑149 (MQ=255)                                                                                                         ccgggcgcggtgccggaagccggtagccgagcagggcgCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGAtgt                              >  6:220199‑M2/39‑149 (MQ=255)                                                                                                         CCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGATGt                              >  4:83200‑M1/1‑149 (MQ=255)                                                                                                          cgggcgcggtgccggaagccggtagccgagcagggcgCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGt                                       <  6:17724‑M2/102‑1 (MQ=255)                                                                                                          cgggcgcggtgccggaagccggtagccgagcagggcgCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGt                                       >  5:17724‑M2/38‑139 (MQ=255)                                                                                                          cgggcgcggtgccggaagccggtagccgagcagggcgCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGAtgtt                             <  5:220199‑M2/112‑1 (MQ=255)                                                                                                           cTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGAtgttg                            <  2:68904/149‑1 (MQ=255)                                                                                                              cTCGGCTACCGGCTTCCTGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATgg                                                                               <  5:151121/95‑1 (MQ=255)                                                                                                              cTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATgg                                                                               >  6:151121/1‑95 (MQ=255)                                                                                                              cTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGTGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGAtgttgt                           <  6:289214/147‑1 (MQ=255)                                                                                                                 ggCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGTACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGATGTTGTACAGc                      >  4:81600/1‑149 (MQ=255)                                                                                                                       cGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGATGAAGGGTACGACGCCCAGCCCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGATGTTGTACAGCggctgg                >  8:11003/1‑149 (MQ=255)                                                                                                                         gCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGCCCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGATGTTGTACGGCggctcgct              >  8:92851/1‑149 (MQ=255)                                                                                                                                     gcgcCCGGCGCATACTTGCCACTGAGCACGCCACGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGATGTTGTACAGCGGCTGGCTGACTATCGGCCt  >  1:254121/1‑149 (MQ=255)                                                                                                                                               |                                                                                                                                           CGACAATGCCCACCCCCTTGGCCTCTGCATACGTCTGAATCTGCC‑GGGCAATGGTCAGCGACTCCTGGCGCCACTCCACTTCCATGATGCGTTTGTCCTGCCGCCCTGCTCGGCTACCGGCTTCCGGCACCGCGCCCGGCGCATACTTGCCACTGAGCACGCCCCGGGCCAGCGGGCTGAAGGGTACGACGCCCAGACCATGGGCGGCGGCGGCCGTGAGCTGTTCGGGCTCGGCCTGGCGGTTGACGATGTTGTACAGCGGCTGGCTGACTATCGGCCT  >  NC_002947/3597322‑3597601

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.