New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4065096	36 (0.700)	3 (0.060)	3/248	NT	7.4%	coding (864/1491 nt)	PP_3582	RND transporter outer membrane protein
	?	NC_002947	= 4065143	41 (0.830)					coding (817/1491 nt)	PP_3582	RND transporter outer membrane protein

TCAGGCTGAGGTCCGGGAAATAGGCTGCCCGCGACACCCCGATGTTGGCGTTGGCCGCCATCACGTTGCGTTCGGCTGCAGCGATGTCCGGGCGCCGCTCCAGCAGCTGCGAAGGCAGCGAAACCGGTATTTGCGGCAACGCGGGAATCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4064945‑4065096 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgccGTGCTGCTGGGCAAGGCTCCGGCCGACTTCGCCCTGGCCGACAGCAAGGCGATTCCCGCGTTGCCGCAAATACCGGTTTCGCTGCCTTCGCAGCTGCTGGAGCGGCGCCCGGACATCGCTGCAGCCGAACGCAACGTGATGGCGGC  <  NC_002947/4065143‑4064998                                                                                                                                                                                                                                                                                                            TCAGGCTGAGGTCCGGGAAATAGGCTGCCCGCGACACCCCGATGTTGGCGTTGGCCGCCATCACGTTGCGTTCGGCTGCAGCGATGTCCGGGCGCCGCTCCAGCAGCTGCGAAGGCAGCGAAACCGGTATTTGCGGCAACGCGGGAATC                                                                                                                                                       >  4:250649/1‑149                     TAGGCTGCCCGCGACACCCCGATGTTGGCGTTGGCCGCCATCACGTTGCGTTCGGCTGCAGCGATGTCCGGGCGCCGCTCCAGCAGCTGCGAAGGCAGCGAAACCGGTATTTGCGGCAACGCGGGAA                                                                                                                                                         >  1:316455/1‑127                     TAGGCTGCCCGCGACACCCCGATGTTGGCGTTGGCCGCCATCACGTTGCGTTCGGCTGCAGCGATGTCCGGGCGCCGCTCCAGCAGCTGCGAAGGCAGCGAAACCGGTATTTGCGGCAACGCGGGAA                                                                                                                                                         <  2:316455/127‑1                                             TTGGCGTTGGCCGCCATCACGTTGCGTTCGGCTGCAGCGATGTCCGGGCGCCGCTCCAGCAGCTGCGAAGGCAGCGAAACCGGTATTTGCGGCAACGCGGGAATCGCCGTGCTGCTGGGCAAGGCTCCGGCCGACTTCGCCCTGGCCGA                                                                                                           >  8:55255/1‑149                                                         GCCATCACGTTGCGTTCGGCTGCAGCGATGTCCGGGCGCCGCTCCAGCAGCTGCGAAGGCAGCGAAACCGGTATTTGCGGCAACGCGGGAATCGCCGTGCTGCTGGGCAAGGCTCCGGCCGACTTCGCCCTGGCCGACAGCAAGGCGAT                                                                                               <  7:55255/149‑1                                                           CATCACGTTGCGTTCGGCTGCAGCGATGTCCGGGCGCCGCTCCAGCAGCTGCGAAGGCAGCGAAACCGGTATTTGCGGCAACGCGGGAATCGCCGTGCTGCTGGGCAAGGCTCCGGCCGACTTCGCCCTGGCCGACAGCAAGGCGATTC                                                                                             <  7:178437/149‑1                                                                                                                                                   ATCGCCGTGCTGCTGGGCAAGGCTCCGGCCGACTTCGCCCTGGCCGACAGCAAGGCGATTCCCGCGTTGCCGCAAATACCGGTTTCGCTGCCTTCGCAGCTGCTGGAGCGGCGCCCGGACATCGCTGCAGCCGAACGCAACGTGATGGC     >  2:20583/1‑149                                                                                                                                                    TCGCCGTGCTGCTGGGCAAGGCTCCGGCCGACTTCGCCCTGGCCGACAGCAAGGCGATTCCCGCGTTGCCGCAAATACCGGTTTCGCTGCCTTCGCAGCTGCTGGAGCGGCGCCCGGACATCGCTGCAGCCGAACGCAACGTGATGGCG    <  6:112150/149‑1                                                                                                                                                      GCCGTGCTGCTGGGCAAGGCTCCGGCCGACTTCGCCCTGGCCGACAGCAAGGCGATTCCCGCGTTGCCGCAAATACCGGTTTCGCTGCCTTCGCAGCTGCTGGAGCGGCGCCCGGACATCGCTGCAGCCGAACGCAACGTGATGGCGG   <  8:106237/148‑1                                                                                                                                                       CCGTGCTGCTGGGCAAGGCTCCGGCCGACTTCGCCCTGGCCGACAGCAAGGCGATTCCCGCGTTGCCGCAAATACCGGTTTCGCTGCCTTCGCAGCTGCTGGAGCGGCGCCCGGACATCGCTGCAGCCGAACGCAACGTGATGGCGGC  >  8:283542/1‑148                                                                                                                                                                                                                                                                                                            TCAGGCTGAGGTCCGGGAAATAGGCTGCCCGCGACACCCCGATGTTGGCGTTGGCCGCCATCACGTTGCGTTCGGCTGCAGCGATGTCCGGGCGCCGCTCCAGCAGCTGCGAAGGCAGCGAAACCGGTATTTGCGGCAACGCGGGAATCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4064945‑4065096 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgccGTGCTGCTGGGCAAGGCTCCGGCCGACTTCGCCCTGGCCGACAGCAAGGCGATTCCCGCGTTGCCGCAAATACCGGTTTCGCTGCCTTCGCAGCTGCTGGAGCGGCGCCCGGACATCGCTGCAGCCGAACGCAACGTGATGGCGGC  <  NC_002947/4065143‑4064998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.