| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4095586 = | 40 (0.770) | 4 (0.080) | 3/246 | NT | 9.4% | intergenic (‑103/‑83) | PP_3603/PP_5607 | GntR family transcriptional regulator/membrane protein |
| ? | NC_002947 | 4095617 = | 39 (0.800) | intergenic (‑134/‑52) | PP_3603/PP_5607 | GntR family transcriptional regulator/membrane protein | |||||
TACCCCCGCCAGCAGCCAGAGGGGGATCAGCAGGCCACTGCCGAGCAAAAGGCGGTCGAGGGTTTTCATACTGCAGATTCCTTCCATGGAACAGTGAGCGTGGAGGCGTACAGTACAGGCTCGCGCAGGCCATGGGCCAGTGATTCTGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4095737‑4095586‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgcgAGCCTGTACTGTACGCCTCCACGCTCACTGTTCCATGGAAGGAATCTGCAGTATGAAAACCCTCGACCGCCTTTTGCTCGGCAGTGGCCTGCTGATCCCCCTCTGGCTGCTG > NC_002947/4095617‑4095728 TACCCCCGCCAGCAGCCAGAGGGGGATCAGCAGGCCACTGCCGAGCAAAAGGCGGTCGAGGGTTTTCATACTGCAGATTCCTTCCATGGAACAGTGAGCGTGGAGGCGTACAGTACAGGCTCGCGCAGGCCATGGGCCAGTGATTCTGC < 6:162460/149‑1 CCCCGCCAGCAGCCAGAGGGGGATCAGCAGGCCACTGCCGAGCAAAAGGCGGTCGAGGGTTTTCATACTGCAGATTCCTTCCATGGAACAGTGAGCGTGGAGGCGTACAGTACAGGCTCGCGCAGGCCATGGGCCAGTGATTCTGCGCG > 3:36873/1‑149 CATACTGCAGATTCCTTCCATGGAACAGTGAGCGTGGAGGCGTACAGTACAGGCTCGCGCAGGCCATGGGCCAGTGATTCTGC < 3:270925/83‑1 CATACTGCAGATTCCTTCCATGGAACAGTGAGCGTGGAGGCGTACAGTACAGGCTCGCGCAGGCCATGGGCCAGTGATTCTGC > 4:270925/1‑83 CAGGCTCGCGCAGGCCATGGGCCAGTGATTCTGCGCGAGCCTGTACTGTACGCCTCCACGCTCACTGTTCCATGGAAGGAATCTGCAGTATGAAAACCCTCGACCGCCTTTTGCTCGGCAGTGGCCTGCTGATCCCCCTCTGGCTGCTG > 7:216111/1‑149 CAGGCTCGCGCAGGCCATGGGCCAGTGATTCTGCGCGAGCCTGTACTGTACGCCTCCACGCTCACTGTTCCATGGAAGGAATCTGCAGTATGAAAACCCTCGACCGCCTTTTGCTCGGCAGTGGCCTGCTGATCCCCCTCTGGCTGCTG > 7:220397/1‑149 GCTCGCGCAGGCCATGGGCCAGTGATTCTGCGCGAGCCTGTACTGTACGCCTCCACGCTCACTGTTCCATGGAAGGAATCTGCAGTATGAAAACCCTCGACCGCCTTTTGCTCGGCAGTGGCCTGCTGA < 7:200630/129‑1 GCTCGCGCAGGCCATGGGCCAGTGATTCTGCGCGAGCCTGTACTGTACGCCTCCACGCTCACTGTTCCATGGAAGGAATCTGCAGTATGAAAACCCTCGACCGCCTTTTGCTCGGCAGTGGCCTGCTGA > 8:200630/1‑129 TACCCCCGCCAGCAGCCAGAGGGGGATCAGCAGGCCACTGCCGAGCAAAAGGCGGTCGAGGGTTTTCATACTGCAGATTCCTTCCATGGAACAGTGAGCGTGGAGGCGTACAGTACAGGCTCGCGCAGGCCATGGGCCAGTGATTCTGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4095737‑4095586‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgcgAGCCTGTACTGTACGCCTCCACGCTCACTGTTCCATGGAAGGAATCTGCAGTATGAAAACCCTCGACCGCCTTTTGCTCGGCAGTGGCCTGCTGATCCCCCTCTGGCTGCTG > NC_002947/4095617‑4095728 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |