| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4096282 = | 50 (0.970) | 5 (0.100) | 5/250 | NT | 10.6% | coding (614/651 nt) | PP_5607 | membrane protein |
| ? | NC_002947 | 4096343 = | 36 (0.730) | intergenic (+24/‑51) | PP_5607/PP_5608 | membrane protein/hypothetical protein | |||||
GCAGCCGGCCATCGTTGCTAGAAGTACTCGCATGTTGCTGTCCTAAGCATCTGAAAGAAAACGGAGTTTGCCTTCGCTTTCCGCAGCCGTGGGCCAGCAATTTGCCGTCAGGGCACAGCCATGCGCAGGGGACTGGCCTTCGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4096426‑4096282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctGCGGAAAGCGAAGGCAAACTCCGTTTTCTTTCAGATGCTTAGGACAGCAACATGCGAGTACTTCTAGCAACGATGGCCGGCTGCCTGCTGGCCACCCTCGCTTTCGGCGCCCAGGCCAGGGCACTGAGCCAGAACGATCGCCACACCT > NC_002947/4096343‑4096490 GCAGCCGGCCATCGTTGCTAGAAGTACTCGCATGTTGCTGTCCTAAGCATCTGAAAGAAAACGGAGTTTGCCTTCGCTTTCCGCAGCCGTGGGCCAGCAATTTGCCGTCAGGGCACAGCCATGCGCAGGGGACTGGCCTTC > 5:152698/1‑141GCAGCCGGCCATCGTTGCTAGAAGTACTCGCATGTTGCTGTCCTAAGCATCTGAAAGAAAACGGAGTTTGCCTTCGCTTTCCGCAGCCGTGGGCCAGCAATTTGCCGTCAGGGCACAGCCATGCGCAGGGGACTGGCCTTC < 6:152698/141‑1 CAGCCGTGGGCCAGCAATTTGCCGTCAGGGCACAGCCATGCGCAGGGGACTGGCCTTCGGCTGCGGAAAGCGAAGGCAAACTCCGTTTTCTTTCAGATGCTTAGGACAGCAACATGCGAGTACTTCTAGCAACGATGGCCGGCTGCCTG > 3:131943/1‑149 AGCCGTGGGCCAGCAATTTGCCGTCAGGGCACAGCCATGCGCAGGGGACTGGCCTTCGGCTGCGGAAAGCGAAGGCAAACTCCGTTTTCTTTCAGATGCTTAGGACAGCAACATGCGAGTACTTCTAGCAACGATGGCCGGCTGCCTGC > 3:50350/1‑149 CCGTGGGCCAGCAATTTGCCGTCAGGGCACAGCCATGCGCAGGGGACTGGCCTTCGGCTGCGGAAAGCGAAGGCAAACTCCGTTTTCTTTCAGATGCTTAGGACAGCAACATGCGAGTACTTCTAGCAACGATGGCCGGCTGCCTGCTG < 4:131943/149‑1 GTGGGCCAGCAATTTGCCGTCAGGGCACAGCCATGCGCAGGGGACTGGCCCACGGCTGCGGAAAGCGAAGGCAAACTCCGTTTTCTTTCAGATGCTTAGGACAGCAACATGCGAGTACTTCTAGCAACGATGGCCGGCTGCCTGCTGGC > 1:221225/1‑149 CGCAGGGGACTGGCCCACGGCTGCGGAAAGCGAAGGCAAACTCCGTTTTCTTTCAGATGCTTAGGACAGCAACATGCGAGTACTTCTAGCAACGATGGCCGGCTGCCTGCTGGCCACCCTCGCTTTCGGCGCCCAGGCCAGGGCACTGA < 2:221225/149‑1 TGCCGAAAGCGAAGGCAAACTCCGTTTTCTTTCAGATGCTTAGGACAGCAACATGCGAGTACTTCTAGCAACGATGGCCGGCTGCCTGCTGGCCACCCTCGCTTTCGGCGCCCAGGCCAGGGCACTGAGCCAGAACGATCGCCACACCT > 6:74775/1‑149 GCAGCCGGCCATCGTTGCTAGAAGTACTCGCATGTTGCTGTCCTAAGCATCTGAAAGAAAACGGAGTTTGCCTTCGCTTTCCGCAGCCGTGGGCCAGCAATTTGCCGTCAGGGCACAGCCATGCGCAGGGGACTGGCCTTCGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4096426‑4096282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctGCGGAAAGCGAAGGCAAACTCCGTTTTCTTTCAGATGCTTAGGACAGCAACATGCGAGTACTTCTAGCAACGATGGCCGGCTGCCTGCTGGCCACCCTCGCTTTCGGCGCCCAGGCCAGGGCACTGAGCCAGAACGATCGCCACACCT > NC_002947/4096343‑4096490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |