New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4502497 =53 (1.030)3 (0.060) 3/250 NT 5.9% coding (126/1380 nt) xanP xanthine permease
?NC_002947 4502554 = 45 (0.910)coding (183/1380 nt) xanP xanthine permease

AGCAGCCCCGCGCCAAATGGGCCGAAGCGTTTGCACTGGACGAAGGTGGCGATACCCGAGATCACCAGCGACATCGAAACGATCAAATTGGTATCACGTGCAGATACACCCAACGCCTGGCAGATCAGCAGGCCAGGGGTGACGATCGGCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4502649‑4502497
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacgTGATACCAATTTGATCGTTTCGATGTCGCTGGTGATCTCGGGTATCGCCACCTTCGTCCAGTGCAAACGCTTCGGCCCATTTGGCGCGGGGCTGCTGATCGTTCAGGGCACCAGCTTCAACTTCGTCGGCCCGCTGATTGCCGGCG  >  NC_002947/4502554‑4502699
                                                                                                                                                                                                                                                                                                           
AGCAGCCCCGCGCCAAATGGGCCGAAGCGTTTGCACTGGACGAAGGTGGCGATACCCGAGATCACCAGCGACATCGAAGCGATCAAATTGGTATCACGTGCAGATACACCCAACGCCTGGCAGATCAGCAGGCCAGGGGTGACGATCGG                                                                                                                                                        >  5:191132/1‑149
  CAGCCCCGCGCCAAATGGGCCGAAGCGTTTGCACTGGACGAAGGTGGCGATACCCGAGATCACCAGCGACATCGAAACGATCAAATTGGTATCACGTGCAGATACACCCAACGCCTGGCAGATCAGCAGGCCAGGGGTGACGATCGGCA                                                                                                                                                      >  4:92998/1‑149
                                           AGGTGGCGATACCCGAGATCACCAGCGACATCGAAACGATCAAATTGGTATCACGTGCAGATACACCCAACGCCTGGCAGATCAGCAGGCCAGGGGTGACGATCGGCA                                                                                                                                                      <  7:280702/108‑1
                                           AGGTGGCGATACCCGAGATCACCAGCGACATCGAAACGATCAAATTGGTATCACGTGCAGATACACCCAACGCCTGGCAGATCAGCAGGCCAGGGGTGACGATCGGCA                                                                                                                                                      >  8:280702/1‑108
                                                                                           TATCACGTGCAGATACACCCAACGCCTGGCAGATCAGCAGGCCAGGGGTGACGATCGGCACGTGATACCAATTTGATCGTTTCGATGTCGCTGGTGATCTCGGGTATCGCCACCTTCGTCCAGTGCAAACGCTTCGGCCCATTTGGCGC                                                             >  3:286237/1‑149
                                                                                                                  GCCTGGCAGATCAGCAGGCCAGGGGTGACGATCGGCACGTGATACCAATTTGATCGTTTCGATGTCGCTGGTGATCTCGGGTATCGCCACCTTCGTCCAGTGCAAACGCTTCGGCCCATTTGGCGCGGGGCTGC                                                     <  7:263082/134‑1
                                                                                                                  GCCTGGCAGATCAGCAGGCCAGGGGTGACGATCGGCACGTGATACCAATTTGATCGTTTCGATGTCGCTGGTGATCTCGGGTATCGCCACCTTCGTCCAGTGCAAACGCTTCGGCCCATTTGGCGCGGGGCTGC                                                     >  8:263082/1‑134
                                                                                                                                                      ACGTGATACCAATTTGATCGTTTCGATGTCGCTGGTGATCTCGGGTATCGCCACCTTCGTCCAGTGCAAACGCTTCGGCCCATTTGGCGCGGGGCTGCTGATCGTTCAGGGCACCAGCTTCAACTTCGTCGGCCCGCTGATTGCCGGCG  <  6:224766/149‑1
                                                                                                                                                                                                                                                                                                           
AGCAGCCCCGCGCCAAATGGGCCGAAGCGTTTGCACTGGACGAAGGTGGCGATACCCGAGATCACCAGCGACATCGAAACGATCAAATTGGTATCACGTGCAGATACACCCAACGCCTGGCAGATCAGCAGGCCAGGGGTGACGATCGGCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4502649‑4502497
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacgTGATACCAATTTGATCGTTTCGATGTCGCTGGTGATCTCGGGTATCGCCACCTTCGTCCAGTGCAAACGCTTCGGCCCATTTGGCGCGGGGCTGCTGATCGTTCAGGGCACCAGCTTCAACTTCGTCGGCCCGCTGATTGCCGGCG  >  NC_002947/4502554‑4502699

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.