| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4852078 | 42 (0.810) | 4 (0.080) | 4/250 | NT | 8.8% | coding (252/603 nt) | recR | recombination protein RecR |
| ? | NC_002947 | = 4852106 | 43 (0.870) | coding (224/603 nt) | recR | recombination protein RecR | |||||
GTGCCCTGCTCTTCGATCCGCGCCATCAGCTGCGGAATACCGATTGCCTCAGGCCCCAGGCCATCCAGCGGCGACAGGTGCCCCTTGAGCACGAAGTAACGGCCACGGTAGCCAGTCTGCTCCACCGCATACACATCGGTCGGCCCCTCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4851926‑4852078‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccCGCGCCGTGACGACACACAGCTGTGCGTGGTCGAGGGGCCGACCGATGTGTATGCGGTGGAGCAGACTGGCTACCGTGGCCGTTACTTCGTGCTCAAGGGGCACCTGTCGCCGCTGGATGGCCTGGGGCCTGAGGCAATCGGTATTC < NC_002947/4852106‑4851960 GTGCCCTGCTCTTCGATCCGCGCCATCAGCTGCGGAATACCGATTGCCTCAGGCCCCAGGCCATCCAGCGGCGACAGGTGCCCCTTGAGCACGAAGTAACGGCCACGGTAGCCAGTCTGCTCCACCGCATACACATCGGTCGGCCCCTC < 3:174036/149‑1 CCTGCTCTTCGATCCGCGCCATCAGCTGCGGAATACCGATTGCCTCAGGCCCCAGGCCATCCAGCGGCGACAGGTGCCCCTTGAGCACGAAGTAACGGCCACGGTAGCCAGTCTGCTCCACCGCATACACATCGGTCGGCCCCTCGAC > 8:76572/1‑148 TTCGATCCGCGCCATCAGCTGCGGAATACCGATTGCCTCAGGCCCCAGGCCATCCAGCGGCGACAGGTGCCCCTTGAGCACGAAGTAACGGCCACGGTAGCCAGTCTGCTCCACCGCATACACATCGGTCGGCCCCTCGACCCGCGCCG > 3:186971/1‑149 CCGTTTGCCTCCGGCCCCAGGCCATCCCGCGGCGACAGGTGCCCCTTGAGCACGAAGTAACGGCCACGGTAGCCAGTCTGCTCCACCGCATACACATCGGTCGGCCCCTCGACCCGCGCCGTGACGACACACAGCTGTGCGTGGTCGA < 7:203416/148‑1 GATTGCCTCAGGCCCCAGGCCATCCAGCGGCGACAGGTGCCCCTTGAGCACGAAGTAACGGCCACGGTAGCCAGTCTGCTCCACCGCATACACATCGGTCGGCCCCTCGACCCGCGCCGTGACGACACACAGCTGTGCGTGGTCGAGGG < 4:186971/149‑1 TGCCGCAGGCCCCAGGCCATCCAGCGGCGACAGGTGCCCCTTGAGCACGAAGTAACGGCCACGGTAGCCAGTCTGCTCCACCGCATACACATCGGTCGGCCCCTCGACCCGCGCCGTGACGACACACAGCTGTGCGTGGTCGAGGGGC < 4:18516/148‑1 CCCGCGCCGTGACGACACACAGCTGTGCGTGGTCGAGGGGCCGACCGATGTGTATGCGGTGGAGCAGACTGGCTACCGTGGCCGTTACTTCGTGCTCAAGGGGCACCTGTCGCCGCTGGATGGCATGGGGCCTGAGGCAATCGGTATTC < 1:195136/149‑1 CCGCGCCGTGACGACACACAGCTGTGCGTGGTCGAGGGGCCGACCGATGTGTATGCGGTGGAGCAGACTGGCTACCGTGGCCGTTACTTCGTGCTCAAGGGGCACCTGTCGCCGCTGGATGGCCTGGGGCCTGAGGCAATCGGTAT < 5:155615/146‑1 CCGCGCCGTGACGACACACAGCTGTGCGTGGTCGAGGGGCCGACCGATGTGTATGCGGTGGAGCAGACTGGCTACCGTGGCCGTTACTTCGTGCTCAAGGGGCACCTGTCGCCGCTGGATGGCCTGGGGCCTGAGGCAATCGGTAT > 6:155615/1‑146 CCGCGCCGTGACGACACACAGCTGTGCGTGGTCGAGGGGCCGACCGATGTGTATGCGGTGGAGCAGACTGGCTACCGTGGCCGTTACTTCGTGCTCAAGGGGCAC > 3:312471/1‑105 CCGCGCCGTGACGACACACAGCTGTGCGTGGTCGAGGGGCCGACCGATGTGTATGCGGTGGAGCAGACTGGCTACCGTGGCCGTTACTTCGTGCTCAAGGGGCAC < 4:312471/105‑1 GTGCCCTGCTCTTCGATCCGCGCCATCAGCTGCGGAATACCGATTGCCTCAGGCCCCAGGCCATCCAGCGGCGACAGGTGCCCCTTGAGCACGAAGTAACGGCCACGGTAGCCAGTCTGCTCCACCGCATACACATCGGTCGGCCCCTCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4851926‑4852078‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccCGCGCCGTGACGACACACAGCTGTGCGTGGTCGAGGGGCCGACCGATGTGTATGCGGTGGAGCAGACTGGCTACCGTGGCCGTTACTTCGTGCTCAAGGGGCACCTGTCGCCGCTGGATGGCCTGGGGCCTGAGGCAATCGGTATTC < NC_002947/4852106‑4851960 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |