New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5612120	44 (0.850)	6 (0.120)	5/246	NT	12.2%	coding (1114/1176 nt)	PP_4931	hypothetical protein
	?	NC_002947	= 5612156	45 (0.920)					coding (1150/1176 nt)	PP_4931	hypothetical protein

AATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5611968‑5612120 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccgGTACGCCCAGCGGAGGGCGTGGCAGGTCGGTCAGGTCGGCCTGTGCTTGTGGACGAATGCCGTCGCGCTCCAGGTGGCTGATTACCCGGTCGCTGAAGTCCGGTGCCAGTGCCAGTTTGGTCGGCCAGCCCACCAGCAGGCGCTG  <  NC_002947/5612156‑5612012                                                                                                                                                                                                                                                                                                            AATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAG                                                                                                                                                       >  4:169355/1‑149                                  TTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGGTACGCCCAGCGGAGGGCGTGGCAGGTCG                                                                                                                      >  2:140557/1‑149                                                 GCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGGTACGCCCAGCGGAGGGCGTGGCAGGTCGGTCAGGTCGGCCTGT                                                                                                       <  1:140557/149‑1                                                                            TGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGGTACGCCCAGCGGAGGGCGTGGCAGGTCGGTCAGGTCGGCCTGT                                                                                                       <  3:259278/122‑1                                                                            TGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGGTACGCCCAGCGGAGGGCGTGGCAGGTCGGTCAGGTCGGCCTGT                                                                                                       >  4:259278/1‑122                                                                                             TTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGGTACGCCCAGCGGAGGGCGTGGCAGGTCGGTCAGGTCGGCCTGTGC                                                                                                     >  3:256747/1‑107                                                                                             TTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGGTACGCCCAGCGGAGGGCGTGGCAGGTCGGTCAGGTCGGCCTGTGC                                                                                                     <  4:256747/107‑1                                                                                                                                                      GCCGGTACGCCCAGCGGAGGGCGTGGCAGGTCGGTCAGGTCGGCCTGTGCTTGTGGACGAATGCCGTCGCGCTCCAGGTGGCTGATTACCCGGTCGCTGAAGTCCGGTGCCAGTGCCAGTTTGGTCGGCCAGCCCACCAGCAGGCGCTG  <  2:135405/149‑1                                                                                                                                                                                                                                                                                                            AATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5611968‑5612120 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccgGTACGCCCAGCGGAGGGCGTGGCAGGTCGGTCAGGTCGGCCTGTGCTTGTGGACGAATGCCGTCGCGCTCCAGGTGGCTGATTACCCGGTCGCTGAAGTCCGGTGCCAGTGCCAGTTTGGTCGGCCAGCCCACCAGCAGGCGCTG  <  NC_002947/5612156‑5612012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.