New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5770663 | 37 (0.720) | 4 (0.080) | 4/244 | NT | 9.3% | coding (209/4716 nt) | PP_5060 | hypothetical protein |
? | NC_002947 | = 5770682 | 43 (0.890) | coding (190/4716 nt) | PP_5060 | hypothetical protein |
TAAGGCGGTAGTCGCCCGCCGGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5770556‑5770663 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctgcaCCGCTGTACCTGATGTCCCTGCAGCCGGATGGTGTCTGGCGCCCTCAGCCGCTGGTGGATGTTGTGCTGCAGGCCCTGCTTGCGGCTAAACCACTGGACCTCGCCCCGGCGGGCGACTACCGCCTTAGCCTGAACCCGCCCCGGCGCT < NC_002947/5770682‑5770535 TAAGGCGGTAGTCGCCCGCCGGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCACCGCTGTACCTGATGTCCCTGCAGCCGGATGGTagatcg > 3:24359/1‑141 TAAGGCGGTAGTCGCCCGCCGGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCACCGCTGTACCTGATGTCCCTGCAGCCGGATGG < 4:24359/140‑1 GTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCACCGCTGTACCTGATGTCCCTGCAGCCGGA < 3:99433/101‑1 GTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCACCGCTGTACCTGATGTCCCTGCAGCCGGA > 4:99433/1‑101 ACCGCTGTACCTGATGTCCCTGCAGCCGGATGGTGTCTGGCGCCCTCAGCCGCTGGTGGATGTTGTGCTGCAGGCCCTGCTTGCGGCTAAACCACTGGACCTCGCCCCGGCGGGCGACTACCGCCTTAGCCTGAACCCGCCCCGGCGCT > 2:90714/1‑149 TAAGGCGGTAGTCGCCCGCCGGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5770556‑5770663 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctgcaCCGCTGTACCTGATGTCCCTGCAGCCGGATGGTGTCTGGCGCCCTCAGCCGCTGGTGGATGTTGTGCTGCAGGCCCTGCTTGCGGCTAAACCACTGGACCTCGCCCCGGCGGGCGACTACCGCCTTAGCCTGAACCCGCCCCGGCGCT < NC_002947/5770682‑5770535 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |