New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5883926	54 (1.050)	4 (0.080)	4/242	NT	8.1%	intergenic (+21/+99)	PP_5157/PP_5158	hypothetical protein/hypothetical protein
	?	NC_002947	= 5884016	41 (0.850)					intergenic (+111/+9)	PP_5157/PP_5158	hypothetical protein/hypothetical protein

CCGTTCCAGAAGGACAACCCGGCTTTTGAAAGTGCCGTAAACAATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5883771‑5883926 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacctgtgcCGGCCCTTTCGCGGGTGAACCCGCTGATGGACACACGTCGAGGGTTGGACCTAGGCCGCCGTAGGATCGGGTTTACCCGCGAAGAGGCCAGCACAGGTTGCAAACAAGACCTTACTGCCCGCCTGCAGTCTCCTGCACACCCTTGAAC  <  NC_002947/5884016‑5883869                                                                                                                                                                                                                                                                                                                  CCGTTCCAGAAGGACAACCCGGCTTTTGAAAGTGCCGTAAACAATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAA                                                                                                                                                             >  5:144021/1‑149  CGTTCCAGAAGGACAACCCGGCTTTTGAAAGTGCCGTAAACAATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAAC                                                                                                                                                            >  8:278692/1‑149                                           AATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGC                                                                                                                                                      <  2:289896/114‑1                                                              AAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCCGGCCCTTTCGCGGGTGAACCCGCTGATGGACACACGTCGAGGGTTGGACCTAG                                                                                                >  7:304206/1‑149                                                                                    ACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCCGGCCCTTTCGCGGGTGAACCCGCTGATGGACACACGTCGAGGGTTGGACCTAGGCCGCCGTAGGATCGGGTTTAC                                                                          <  8:304206/149‑1                                                                                            AGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCCGGCCCTTTCGCGGGTGAACCCGCTGATGGACACACGTCGAGGGTTGGACCTAGGCCGCCGTAGGATCGGGTTTACCCGCG                                                                     >  6:171951/1‑146                                                                                                  GGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCCGGCCCTTTCGCGGGTGAACCCGCTGATGGACACACGTCGAGGGTTGGACCTAGGCCGCCGTAGGATCGGGTTTACCCGCGAAGAGGCCA                                                            <  5:171951/149‑1                                                                                                                                                     ACCTGTGCCGGCCCTTTCGCGGGTGAACCCGCTGATGGACACACGTCGAGGGTTGGACCTAGGCCGCCGTAGGATCGGGTTTACCCGCGAAGAGGCCAGCACAGGTTGCAAACAAGACCTTACTGCCCGCCTGCAGTCTCCTGCACACC         >  6:144021/1‑149                                                                                                                                                     ACCTGTGCCGGCCCTTTCGCGGGTGAACCCGCTGATGGACACACGTCGAGGGTTGGACCTAGGCCGCCGTAGGATCGGGTTTACCCGCGAAGAGGCCAGCACAGGCTGCAAACAAGACCTTACTGCACGCCTGCAGTCTCCTGCACACa         >  8:203684/1‑148                                                                                                                                                         GTGCCGCCCCTTTCGCGGGTGAACCAGCTGATGGACACACGTCGAGGGTTGGACCTAGGCCGCCGTAGGATCGGGTTTACCCGCGAAGAGGCCAGCACAGGTTGCAAACAAGACCTTACTGCCCGCCTGCAGTCTCCTGCACACCCTT      >  6:110944/1‑148                                                                                                                                                            CCGGCCCTTTCGCGGGTGAACCCGCTGATGGACACTCGTCGAGGGTTGGACCTAGGCCGCCGTAGGATCGGGTTTACCCGCGAAGAGGCCAGCACAGGTTGCAAACAAGACCTTACTGCCCACCTGCAGTCTCCTGCACACCCTTGAA   <  1:9420/148‑1                                                                                                                                                            CCGGCCCTTTCGCGGGTGAACCCGCTGATGGACACACGTCGAGGGTTGGACCTAGGCCGCCGTAGGATCGGGTTTACCCGCGAAGAGGCCAGCACAGGTTGCAAACAAGACCTTACTGCCCGCCTGCAGTCTCCTGCACACACTTGAAC  >  2:62385/1‑149                                                                                                                                                                                                                                                                                                                  CCGTTCCAGAAGGACAACCCGGCTTTTGAAAGTGCCGTAAACAATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5883771‑5883926 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacctgtgcCGGCCCTTTCGCGGGTGAACCCGCTGATGGACACACGTCGAGGGTTGGACCTAGGCCGCCGTAGGATCGGGTTTACCCGCGAAGAGGCCAGCACAGGTTGCAAACAAGACCTTACTGCCCGCCTGCAGTCTCCTGCACACCCTTGAAC  <  NC_002947/5884016‑5883869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.