New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5883926	54 (1.050)	4 (0.080)	4/242	NT	8.1%	intergenic (+21/+99)	PP_5157/PP_5158	hypothetical protein/hypothetical protein
	?	NC_002947	= 5884016	41 (0.850)					intergenic (+111/+9)	PP_5157/PP_5158	hypothetical protein/hypothetical protein

AAGGACAACCCGGCTTTTGAAAGTGCCGTAAACAATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGATATATTAGCCAAAGCCCGCTGCGCCTGGTCCAGTTCCAGCT  >  NC_002947/5883780‑5884074                                                                                                                                                   |                                                                                                                                                     aaGGACAACCCGGCTTTTGAAAGTGCCGTAAACAATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTg                                                                                                                                                    <  4:58693/149‑1 (MQ=255)       aaCCCGGCTTTTGAAAGTGCCGTAAACAATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCctct                                                                                                                                              >  3:80814/1‑149 (MQ=255)            ggCTTTTGAAAGTGCCGTAAACAATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTcgcg                                                                                                                                         >  3:319801/1‑149 (MQ=255)             gCTTTTGAAAGTGCCGTAAACAATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCgg                                                                                                                                        >  6:124718/1‑149 (MQ=255)             gCTTTTGAAAGTGCCGTAAACAATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCgg                                                                                                                                        <  7:294036/149‑1 (MQ=255)                   gAAAGTGCCGTAAACAATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAAc                                                                                                                                  >  1:62385/1‑149 (MQ=255)                    aaaGTGCCGTAAACAATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAAcc                                                                                                                                 >  1:175631/1‑149 (MQ=255)                    aaaGTGCCGTAAACAATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAAcc                                                                                                                                 >  4:298855/1‑149 (MQ=255)                       gTGCCGTAAACAATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGa                                                                                                                              <  7:222947/149‑1 (MQ=255)                          ccGTAAACAATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATcc                                                                                                                           <  7:278692/149‑1 (MQ=255)                                  aaTGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGC                                                                                                                                                      <  2:289896‑M1/114‑1 (MQ=255)                                             aCGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCaa                                                                                                        <  8:271226/149‑1 (MQ=255)                                             aCGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGCTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCaaa                                                                                                        >  2:13116/1‑149 (MQ=255)                                               gTTTGAAAGACAGAGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAAcc                                                                                                      >  6:311332/1‑149 (MQ=255)                                                  tGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTc                                                                                                   >  3:147957/1‑149 (MQ=255)                                                    aaaGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGa                                                                                                 >  4:137361/1‑149 (MQ=255)                                                     aaGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCcggccctttcgcgggtgaacccgctgatggacacacgtcgagggttggacctag                                                                                                >  7:304206‑M1/1‑95 (MQ=255)                                                     aaGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGAc                                                                                                >  2:142068/1‑149 (MQ=255)                                                      aGACAGTGGCCGGACTGCCGAACTAGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACg                                                                                               >  7:203684/1‑149 (MQ=255)                                                        aCAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACgtg                                                                                             >  4:255214/1‑149 (MQ=255)                                                         cAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGTTCCAACCCTCGACgtgt                                                                                            <  5:311332/149‑1 (MQ=255)                                                          aGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACgtgtg                                                                                           >  6:154955/1‑149 (MQ=255)                                                              gCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTcc                                                                                        <  3:298855/148‑1 (MQ=255)                                                                       ccGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCggg                                                                               <  4:319801/148‑1 (MQ=255)                                                                       ccGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGt                                                                              >  2:139510/1‑149 (MQ=255)                                                                       ccGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATACTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGt                                                                              >  5:92288/1‑149 (MQ=255)                                                                        cGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGt                                                                              >  5:110944/1‑148 (MQ=255)                                                                         gAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGtt                                                                             >  8:189302/1‑148 (MQ=255)                                                                           aCTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCcggccctttcgcgggtgaacccgctgatggacacacgtcgagggttggacctaggccgccgtaggatcgggtttac                                                                          <  8:304206‑M1/149‑77 (MQ=255)                                                                            cTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCAcc                                                                         <  1:142068/149‑1 (MQ=255)                                                                             ttGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCAccc                                                                        >  3:91757/1‑149 (MQ=255)                                                                                aGCAGAAGTGGTTCAAGGGTCTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCcgc                                                                      <  2:175631/148‑1 (MQ=255)                                                                                   aGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCcggccctttcgcgggtgaacccgctgatggacacacgtcgagggttggacctaggccgccgtaggatcgggtttacccgcg                                                                     >  6:171951‑M1/1‑65 (MQ=255)                                                                                   aGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTCTTTGCAACCTCTGCTGGCCTCTTCGCGGGAAAACCCGATCCTACGCCGGCCTAGGTCCAACCCACGACCTGTGACCATCAGCGCGTTCACCCCCGaa                                                                   >  4:35693/1‑148 (MQ=255)                                                                                    gAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAg                                                                 <  4:91757/149‑1 (MQ=255)                                                                                        tGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGcc                                                             <  5:154955/149‑1 (MQ=255)                                                                                         ggTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCcggccctttcgcgggtgaacccgctgatggacacacgtcgagggttggacctaggccgccgtaggatcgggtttacccgcgaagaggcca                                                            <  5:171951‑M1/149‑91 (MQ=255)                                                                                          gTTCAAGTGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGg                                                           >  2:62385‑M2/1‑148 (MQ=255)                                                                                           ttCAAGGGTGTGCAGGAGACTGCAGGTGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGAGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGg                                                           <  1:9420‑M2/148‑2 (MQ=255)                                                                                              aaGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCTGGTTCACCCGCGAAAGGGGCGgcac                                                        >  6:110944‑M2/1‑144 (MQ=255)                                                                                                 tgtgtgCAGGAGACTGCAGGCGTGCAGTAAGGTCTTGTTTGCAGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGgcacaggt                                                    >  8:203684‑M2/2‑141 (MQ=255)                                                                                                 ggTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGgcacaggt                                                    >  6:144021‑M2/1‑141 (MQ=255)                                                                                                    gtgCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCa                                                 <  3:137361/149‑1 (MQ=255)                                                                                                       cAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAg                                               >  5:332628/1‑148 (MQ=255)                                                                                                         ggAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAg                                            <  5:124718/149‑1 (MQ=255)                                                                                                          gagaCTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAg                                            >  7:114375/1‑148 (MQ=255)                                                                                                           agaCTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGat                                          <  4:80814/149‑1 (MQ=255)                                                                                                            gaCTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGata                                         >  7:64093/1‑149 (MQ=255)                                                                                                             aCTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGatat                                        <  3:255214/149‑1 (MQ=255)                                                                                                               tGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGatatat                                      >  6:206266/1‑149 (MQ=255)                                                                                                                 cAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGATATATTa                                    <  4:147957/149‑1 (MQ=255)                                                                                                                  aGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGATATATTAg                                   >  8:72666/1‑149 (MQ=255)                                                                                                                   ggCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGATATATTAGc                                  <  8:64093/149‑1 (MQ=255)                                                                                                                         cAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGATATATTAGCCAAAGc                            >  6:198071/1‑149 (MQ=255)                                                                                                                         cAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGATATATTAGCCAAAGc                            >  5:53093/1‑149 (MQ=255)                                                                                                                                   ttGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCAt                                                                                      >  8:199827/1‑81 (MQ=255)                                                                                                                                   ttGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCAt                                                                                      <  7:199827/81‑1 (MQ=255)                                                                                                                                   ttGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGACGGCACAGGTTCAAGCAGATATATTAGCCAAAGCCCGCTGCGcc                  >  5:110470/1‑149 (MQ=255)                                                                                                                                        tGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGATATATTAGCCAAAGCCCGCTGCGCCTGGt              <  7:189302/148‑1 (MQ=255)                                                                                                                                          cAACCTGTGCTGGCCTCTTCGGGTGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCATCGACTTGTGTCCATCAGCTGCTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGATATATTAGCCAAAGCCCGCTGCGCCTGGTCCa           <  3:35693/149‑1 (MQ=255)                                                                                                                                          cAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGATATATTAGCCAAAGCCCGCTGCGCCTGGTCCa           <  5:198071/149‑1 (MQ=255)                                                                                                                                           aaCCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGATATATTAGCCAAAGCCCGCTGCGCCTGGTc             >  6:57888/1‑146 (MQ=255)                                                                                                                                           aaCCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGATATATTAGCCAAAGCCCGCTGCGCCTGGTc             <  5:57888/146‑1 (MQ=255)                                                                                                                                           aaCCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGATATATTAGCCAAAGCCCGCTGCGCCTGGTCCAg          >  1:35/1‑149 (MQ=255)                                                                                                                                            aCCTGTGCcggccctttcgcgggtgaacccgctgatggacacacgtcgagggttggacctaggccgccgtaggatcgggtttacccgcgaagaggccagcacaggttgcaaacaagaccttactgcccgcctgcagtctcctgcacacc         >  6:144021‑M1/1‑8 (MQ=255)                                                                                                                                            aCCTGTGCcggccctttcgcgggtgaacccgctgatggacacacgtcgagggttggacctaggccgccgtaggatcgggtttacccgcgaagaggccagcacaggctgcaaacaagaccttactgcacgcctgcagtctcctgcacaca         >  8:203684‑M1/1‑8 (MQ=255)                                                                                                                                             ccTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGAGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGATATATTAGCCAAAGCCCGCTGCGCCTGGTCCAGtt        <  2:9420/149‑1 (MQ=255)                                                                                                                                                gtgCcgcccctttcgcgggtgaaccagctgatggacacacgtcgagggttggacctaggccgccgtaggatcgggtttacccgcgaagaggccagcacaggttgcaaacaagaccttactgcccgcctgcagtctcctgcacaccctt      >  6:110944‑M1/1‑4 (MQ=255)                                                                                                                                                 tgCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCCCCCGCGAAAGGGCCGGCACAGGTTCAAGCAGATATATTAGCCAAAGCCCGCTGCGCCTGGTCCAGTTCCAg    >  3:283197/1‑149 (MQ=255)                                                                                                                                                 tgCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGATATATTAGCCAAAGCCCGCTGCGCCTGGTCCAGTTCCAg    <  5:206266/149‑1 (MQ=255)                                                                                                                                                   ccggccctttcgcgggtgaacccgctgatggacactcgtcgagggttggacctaggccgccgtaggatcgggtttacccgcgaagaggccagcacaggttgcaaacaagaccttactgcccacctgcagtctcctgcacacccttgaa   <  1:9420‑M1/148‑148 (MQ=255)                                                                                                                                                   ccggccctttcgcgggtgaacccgctgatggacacacgtcgagggttggacctaggccgccgtaggatcgggtttacccgcgaagaggccagcacaggttgcaaacaagaccttactgcccgcctgcagtctcctgcacacacttgaac  >  2:62385‑M1/1‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     AAGGACAACCCGGCTTTTGAAAGTGCCGTAAACAATGCGTTGCAACGTTTGAAAGACAGTGGCCGGACTGCCGAACTTGAGCAGAAGTGGTTCAAGGGTGTGCAGGAGACTGCAGGCGGGCAGTAAGGTCTTGTTTGCAACCTGTGCTGGCCTCTTCGCGGGTAAACCCGATCCTACGGCGGCCTAGGTCCAACCCTCGACGTGTGTCCATCAGCGGGTTCACCCGCGAAAGGGCCGGCACAGGTTCAAGCAGATATATTAGCCAAAGCCCGCTGCGCCTGGTCCAGTTCCAGCT  >  NC_002947/5883780‑5884074

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.