| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6117172 = | 47 (0.910) | 4 (0.080) | 4/242 | NT | 8.7% | coding (1381/1401 nt) | lpd | dihydrolipoyl dehydrogenase |
| ? | NC_002947 | 6117223 = | 40 (0.830) | intergenic (+31/+81) | lpd/PP_5367 | dihydrolipoyl dehydrogenase/transketolase domain‑containing protein | |||||
TCAAGGCTTGGCTGTGACGTGATGCCTGAAGATAGAGCCGGCCGGAATTAAAGGCGGCTCTATCCCTGTATGCCCGCAAAGCAAATGCCGAAGGCAAGGGCATGGCCTGACGCAGCGAATGGGGCTCGTCAGATTTGCATGGCCATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6117320‑6117172‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccatgccCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCAGC > NC_002947/6117223‑6117367 TCAAGGCTTGGCTGTGACGTGATGCCTGAAGATAGAGCCGGCCGGAATTAAAGGCGGCTCTATCCCTGTATGCCCGCAAAGCAAATGCCGAAGGCAAGGGCATGGCCTGACGCAGCGAATGGGGCTCGTCAGATTTGCATGGCCATGC > 8:245685/1‑148TCAAGGCTTGGCTGTGACGTGATGCCTGAAGATAGAGCCGGCCGGAATTAAAGGCGGCTCTATCCCTGTATGCCCGCAAAGCAAATGCCGAAGGCAAGGGCATGGCCTGAAGCAGCGAATGGGGCTCGTCAGATTTGCATGGCCATGC > 7:81545/1‑148 AAGGGCATGGCCTGACGCAGCGAATGGGGCTCGTCAGATTTGCATGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCA < 1:129192/133‑1 AAGGGCATGGCCTGACGCAGCGAATGGGGCTCGTCAGATTTGCATGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCA > 2:129192/1‑133 GGCCTGACGCAGCGAATGGGGCTCGTCAGATTTGCATGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCT < 6:185799/141‑1 GGCCTGACGCAGCGAATGGGGCTCGTCAGATTTGCATGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAAATCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCT > 5:185799/1‑141 GGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCAT < 5:251791/149‑1 ATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCA < 6:298394/148‑1 ATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATG > 5:298394/1‑146 TGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCAGC > 5:207017/1‑149 TCAAGGCTTGGCTGTGACGTGATGCCTGAAGATAGAGCCGGCCGGAATTAAAGGCGGCTCTATCCCTGTATGCCCGCAAAGCAAATGCCGAAGGCAAGGGCATGGCCTGACGCAGCGAATGGGGCTCGTCAGATTTGCATGGCCATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6117320‑6117172‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccatgccCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCAGC > NC_002947/6117223‑6117367 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |