New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1978503 =	57 (1.100)	4 (0.080)	4/250	NT	7.0%	coding (2167/2241 nt)	PP_1770	3‑phosphoshikimate 1‑carboxyvinyltransferase
	?	NC_002947	1978559 =	52 (1.050)					coding (2223/2241 nt)	PP_1770	3‑phosphoshikimate 1‑carboxyvinyltransferase

CCGACCCCGGACGGCATCATCATCGACGGTGGCCAGATGGGCGGCGGCGAAGTGCATGGGCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGA  >  NC_002947/1978356‑1978646                                                                                                                                                    |                                                                                                                                                ccGACCCCGGACGGCATCATCATCGACGGTGGCCAGATGGGCGGCGGCGAAGTGCATGGGCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGc                                                                                                                                                <  3:219520/149‑1 (MQ=255)  gccagcaagcgatacagcgcgccggagtccagcagcttccagcccagctcgcgggcaatcagcccggcgcccgtgcccttgcccgagccgctgggtccgtcgatggtgataaccggtgccattgaattcacgccttgccctcttctGcc                                                                                                                                               <  3:209911‑M1/3‑1 (MQ=255)   ccagcaagcgatacagcgcgccggagtccagcagcttccagcccagctcgcgggcaatcagcccggcgaccgtgcccttgcccgagccgcttggtccgtcgatggtgataaccggtgccattgaattcacgacttgccctcttctGcc                                                                                                                                               >  3:199462‑M1/146‑148 (MQ=255)       ccGGACGGCATCATCATCGACGGTGGCCAGATGGGCGGCGGCGAAGTGCATGGGCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTc                                                                                                                                          <  7:219890/149‑1 (MQ=255)               catcatcatCGACGGTGGCCAGATGGGCGGCGGCGAAGTGCATGGGCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTcccc                                                                                                                                   >  1:31669/1‑148 (MQ=255)                 agcgcgccggagtccagcagcttccagcccagctcgcgggcaatcagcccggcgaccgtgcccttgcccgagccgcgtggtccgtcgaaggtgataaccggtgccattgaattcaccccttgccctcttctGCCACCTCGTTCCCCaa                                                                                                                                 <  2:279599‑M1/17‑1 (MQ=255)                   atcatcGACGGTGGCCAGATGGGCGGCGGCGAAGTGCATGGGCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACtt                                                                                                                              >  2:290014/1‑149 (MQ=255)                   atcatcGACGGTGGCCAGATGGGCGGCGGCGAAGTCCATGGGCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCATCGCTGCGCGCCAGTGCGCCGAATCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACtt                                                                                                                              >  3:265862/1‑149 (MQ=255)                                 ccAGATGGGCGGCGGCGAAGTGCATGGGCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTgcg                                                                                                                >  2:323427/1‑149 (MQ=255)                                      tGGGCGGCGGCGAAGTGCATGGGCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGaa                                                                                                           <  4:171179/149‑1 (MQ=255)                                         gcggcggcgAAGTGCATGGGCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTg                                                                                                        >  3:66954/1‑149 (MQ=255)                                         gcggcggcgAAGTGCATGGGCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTg                                                                                                        <  3:61094/149‑1 (MQ=255)                                         gcggcggcgAAGTGCATGGGCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTg                                                                                                        >  5:325211/1‑149 (MQ=255)                                         gcggcggcgAAGTGCATGGGCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTg                                                                                                        >  5:329562/1‑149 (MQ=255)                                           gcccagctcgcgggaaatcagcccggcgaccgtgcccttgcccgagccgcgtggtccggcgctggtgataaccggtgccattgaattcacgacttgccctcttctGCCACCTCGTTCCCCACCTTCCTGGCGCTGTGCGCCGAAGTggg                                                                                                      >  1:279599‑M1/106‑149 (MQ=255)                                             cggcgAAGTGCATGGGCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGa                                                                                                    >  4:53607/1‑149 (MQ=255)                                                 gAAGTGCATGGGCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTcg                                                                                                >  8:106916/1‑149 (MQ=255)                                                      gcatgggcatggTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTgg                                                                                           >  4:190629/1‑149 (MQ=255)                                                      gcatgggcatggTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTgg                                                                                           >  3:222979/1‑149 (MQ=255)                                                            tcagcccggcgaccgtgcccttgcccgagccgcttggtccgtcgatggtgataaccggtgccattgaattcacgacttgccctcttctGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCag                                                                                        <  2:28039‑M1/58‑1 (MQ=255)                                                            gcatggTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCag                                                                                        >  8:5065/1‑146 (MQ=255)                                                              agcccggcgaccgtgcccttgcccgagccgcttggtccgtcgatggtgataaccggtgccattgaattcacgacttgccctcttctGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCagaaga                                                                                    >  1:28039‑M1/87‑148 (MQ=255)                                                                ggTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAggg                                                                                 >  3:73069/1‑149 (MQ=255)                                                                 gTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAg                                                                                                          >  5:66329/1‑123 (MQ=255)                                                                 gTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAg                                                                                                          <  6:66329/123‑1 (MQ=255)                                                                 gTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAggg                                                                                 <  4:222979/148‑1 (MQ=255)                                                                 gTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAggg                                                                                 <  2:31669/148‑1 (MQ=255)                                                                      caccGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGc                                                                                <  8:63394/144‑1 (MQ=255)                                                                      caccGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGc                                                                                >  7:63394/1‑144 (MQ=255)                                                                             tCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAAtt                                                                    <  3:163284/149‑1 (MQ=255)                                                                             tCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAAtt                                                                    <  6:325211/149‑1 (MQ=255)                                                                             tCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAAtt                                                                    <  4:73069/149‑1 (MQ=255)                                                                             tCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAAtt                                                                    <  6:329562/149‑1 (MQ=255)                                                                                ccATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGt                                                                         >  1:70483/1‑141 (MQ=255)                                                                                ccATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGt                                                                         <  2:70483/141‑1 (MQ=255)                                                                                 cATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAAt                                                                <  2:210313/149‑1 (MQ=255)                                                                                 cATGGCCTTTAGCGTGGCTTCGCTGCACGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAAt                                                                <  5:250652/149‑1 (MQ=255)                                                                                    ggCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATgg                                                              >  6:283363/1‑148 (MQ=255)                                                                                    ggCCTTTAGCGTGGCTTCACTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATgg                                                              >  5:8784/1‑148 (MQ=255)                                                                                     gcgtttAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTGGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCa                                                            <  4:265862/146‑1 (MQ=255)                                                                                     gCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCa                                                            >  1:315863/1‑149 (MQ=255)                                                                                        tttAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGaa                                                                                                           <  8:52484/99‑1 (MQ=255)                                                                                        tttAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGaa                                                                                                           >  7:52484/1‑99 (MQ=255)                                                                                         ttAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTgg                                                                                           >  1:121084/1‑114 (MQ=255)                                                                                         ttAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTgg                                                                                           <  2:121084/114‑1 (MQ=255)                                                                                          tAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCgg                                                        <  1:318421/148‑1 (MQ=255)                                                                                             cGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTAt                                                    <  7:106916/149‑1 (MQ=255)                                                                                               tGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCa                                                  <  3:53607/149‑1 (MQ=255)                                                                                                   ttCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCAt                                              >  4:87820/1‑149 (MQ=255)                                                                                                     cGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATc                                             <  3:190629/148‑1 (MQ=255)                                                                                                     cGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATc                                             <  7:5065/148‑1 (MQ=255)                                                                                                       cTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGAc                                          >  6:278375/1‑149 (MQ=255)                                                                                                          cgcgcCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGa                                       <  4:66954/149‑1 (MQ=255)                                                                                                                 gTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGc                                 <  4:159480/148‑1 (MQ=255)                                                                                                                 gTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGc                                 >  3:159480/1‑148 (MQ=255)                                                                                                                     gcCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTc                            >  7:262870/1‑149 (MQ=255)                                                                                                                            cGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCaa                      <  1:323427/148‑1 (MQ=255)                                                                                                                            cGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCaa                      <  1:290014/148‑1 (MQ=255)                                                                                                                             gCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAAGTCAATGGCACCGGGTATCACCATCGCCGGACCAAGCGGCTCGGGCAAgg                    >  4:209911/1‑149 (MQ=255)                                                                                                                                   aTGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACg               <  6:48590/148‑1 (MQ=255)                                                                                                                                   aTGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACg               <  2:315863/148‑1 (MQ=255)                                                                                                                                   aTGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACg               >  5:48590/1‑148 (MQ=255)                                                                                                                                   aTGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTCGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACg               <  5:283363/148‑1 (MQ=255)                                                                                                                                             cAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCt    >  6:221595/1‑149 (MQ=255)                                                                                                                                               aCGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGTCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGa  <  6:8784/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                CCGACCCCGGACGGCATCATCATCGACGGTGGCCAGATGGGCGGCGGCGAAGTGCATGGGCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGA  >  NC_002947/1978356‑1978646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.