New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1978503 =	57 (1.100)	4 (0.080)	4/250	NT	7.0%	coding (2167/2241 nt)	PP_1770	3‑phosphoshikimate 1‑carboxyvinyltransferase
	?	NC_002947	1978559 =	52 (1.050)					coding (2223/2241 nt)	PP_1770	3‑phosphoshikimate 1‑carboxyvinyltransferase

GCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAGCTGGGCTGGAAGCTGCTGGACTCCGGCGCGCTGTATCGCTTGCTGGC  >  NC_002947/1978415‑1978704                                                                                                                                                 |                                                                                                                                                  tcagcccggcgaccgtgcccttgcccgagccgcttggtccgtcgatggtgataaccggtgccattgaattcacgacttgccctcttctGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCag                                                                                                                                                  <  2:28039‑M1/58‑1 (MQ=255) gcatggTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCag                                                                                                                                                  >  8:5065/1‑146 (MQ=255)   agcccggcgaccgtgcccttgcccgagccgcttggtccgtcgatggtgataaccggtgccattgaattcacgacttgccctcttctGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCagaaga                                                                                                                                              >  1:28039‑M1/87‑148 (MQ=255)     ggTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAggg                                                                                                                                           >  3:73069/1‑149 (MQ=255)      gTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAggg                                                                                                                                           <  4:222979/148‑1 (MQ=255)      gTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAggg                                                                                                                                           <  2:31669/148‑1 (MQ=255)           caccGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGc                                                                                                                                          >  7:63394/1‑144 (MQ=255)           caccGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGc                                                                                                                                          <  8:63394/144‑1 (MQ=255)                  tCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAAtt                                                                                                                              <  6:325211/149‑1 (MQ=255)                  tCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAAtt                                                                                                                              <  6:329562/149‑1 (MQ=255)                  tCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAAtt                                                                                                                              <  3:163284/149‑1 (MQ=255)                  tCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAAtt                                                                                                                              <  4:73069/149‑1 (MQ=255)                     ccATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGt                                                                                                                                   <  2:70483/141‑1 (MQ=255)                     ccATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGt                                                                                                                                   >  1:70483/1‑141 (MQ=255)                      cATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAAt                                                                                                                          <  2:210313/149‑1 (MQ=255)                      cATGGCCTTTAGCGTGGCTTCGCTGCACGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAAt                                                                                                                          <  5:250652/149‑1 (MQ=255)                         ggCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATgg                                                                                                                        >  6:283363/1‑148 (MQ=255)                         ggCCTTTAGCGTGGCTTCACTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATgg                                                                                                                        >  5:8784/1‑148 (MQ=255)                          gcgtttAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTGGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCa                                                                                                                      <  4:265862/146‑1 (MQ=255)                          gCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCa                                                                                                                      >  1:315863/1‑149 (MQ=255)                               tAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCgg                                                                                                                  <  1:318421/148‑1 (MQ=255)                                  cGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTAt                                                                                                              <  7:106916/149‑1 (MQ=255)                                    tGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCa                                                                                                            <  3:53607/149‑1 (MQ=255)                                        ttCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCAt                                                                                                        >  4:87820/1‑149 (MQ=255)                                          cGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATc                                                                                                       <  3:190629/148‑1 (MQ=255)                                          cGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATc                                                                                                       <  7:5065/148‑1 (MQ=255)                                            cTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGAc                                                                                                    >  6:278375/1‑149 (MQ=255)                                               cgcgcCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGa                                                                                                 <  4:66954/149‑1 (MQ=255)                                                      gTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGc                                                                                           <  4:159480/148‑1 (MQ=255)                                                      gTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGc                                                                                           >  3:159480/1‑148 (MQ=255)                                                          gcCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTc                                                                                      >  7:262870/1‑149 (MQ=255)                                                                 cGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCaa                                                                                <  1:290014/148‑1 (MQ=255)                                                                 cGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCaa                                                                                <  1:323427/148‑1 (MQ=255)                                                                  gCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAAGTCAATGGCACCGGGTATCACCATCGCCGGACCAAGCGGCTCGGGCAAgg                                                                              >  4:209911/1‑149 (MQ=255)                                                                        aTGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACg                                                                         >  5:48590/1‑148 (MQ=255)                                                                        aTGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACg                                                                         <  6:48590/148‑1 (MQ=255)                                                                        aTGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACg                                                                         <  2:315863/148‑1 (MQ=255)                                                                        aTGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTCGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACg                                                                         <  5:283363/148‑1 (MQ=255)                                                                                  cAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCt                                                              >  6:221595/1‑149 (MQ=255)                                                                                   tcttctgccacgcgaatccccacttcggcgcacagcgccaggaagttggggaacgaggtggcAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCt                                                              >  1:28039‑M2/63‑148 (MQ=255)                                                                                    aCGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGTCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGa                                                            <  6:8784/149‑1 (MQ=255)                                                                                       ctgccacgcgaatccccacttcggcgcacagcgccaggaagttggggaacgaggtggcAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGa                                                            <  2:28039‑M2/88‑1 (MQ=255)                                                                                          CCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGccc                                                      <  1:180293‑M1/149‑1 (MQ=255)                                                                                             CCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAGTTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCcgc                                                    <  8:127200‑M1/148‑1 (MQ=255)                                                                                                cGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAgc                                                >  4:54902/1‑149 (MQ=255)                                                                                                     cccacttcggcgcacagcgccaggaaggtggggaacgaggtggcAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCAGCGCCGGACCACGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTTCCCGCGAgctgggc                                           >  1:279599‑M2/45‑149 (MQ=255)                                                                                                     cccAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAgctgggc                                           <  5:278375/149‑1 (MQ=255)                                                                                                     cccAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAgctgggc                                           >  7:295040/1‑149 (MQ=255)                                                                                                      ccAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAgctgggct                                          >  1:182136/1‑149 (MQ=255)                                                                                                      ccAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAgctgggct                                          >  3:304048/1‑149 (MQ=255)                                                                                                       cAACTTCCTGGCGCTGTGCGACGAAGTGGGGATTAGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACAAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAgctgggatg                                         >  7:92633/1‑149 (MQ=255)                                                                                                        aaCTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAgctgggctgg                                        <  3:54902/149‑1 (MQ=255)                                                                                                                 gcgcTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAGCTGGGCTGGAAGctgctg                               <  2:180293/149‑1 (MQ=255)                                                                                                                 gcgcTGTGCGCCGAAGTGGGGATTCGCGTCGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAg                                                                               <  4:89124/101‑1 (MQ=255)                                                                                                                 gcgcTGTGCGCCGAAGTGGGGATTCGCGTAGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAg                                                                               >  3:89124/1‑101 (MQ=255)                                                                                                                               aGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGACTTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAGCTGGGCTGGAAGCTGCTGGACTCCGGCGCGCt                 <  7:127200/149‑1 (MQ=255)                                                                                                                               aGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAGCTGGGCTGGAAGCTGCTGGACTCCGGCGCGCt                 <  8:295040/149‑1 (MQ=255)                                                                                                                                ttggggaacgaggtggcAGAAGAGGGCAAGGGGTGAATTCAATGGCACCGGTTATCACCTTCGACGGACCACGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAGCTGGGCTGGAAGCTGCTGGACTCCGGCGCGCt                 <  2:279599‑M2/131‑1 (MQ=255)                                                                                                                                   gggATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAGCTGGGCTGGAAGCTGCTGGACTCCGGCGCGCTGTa              <  2:182136/148‑1 (MQ=255)                                                                                                                                     gATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAGCTGGGCTGGAAg                                     >  4:215039/1‑123 (MQ=255)                                                                                                                                     gATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAGCTGGGCTGGAAg                                     <  3:215039/123‑1 (MQ=255)                                                                                                                                          gcgTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAGCTGGGCTGGAAGCTGCTGGa                             >  7:293433/1‑126 (MQ=255)                                                                                                                                          gcgTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAGCTGGGCTGGAAGCTGCTGGa                             <  8:293433/126‑1 (MQ=255)                                                                                                                                              ggcAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAGCTGGGCTGGAAGCTGCTGGACTCCGGCGCGCTGTATCGCTTGCTgg   >  3:199462‑M2/4‑148 (MQ=255)                                                                                                                                              ggcAGAAGAGGGCAAGGCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCCAGCGGCTCGGGCAAGGGCACGGGCGCCGGGCTGATTGCCCGCGAGCTGGGCTGGAAGCTGCTGGACTCCGGCGCGCTGTATCGCTTGCTGGc  <  3:209911‑M2/146‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                  GCATGGTGACCACCGCATCGCCATGGCCTTTAGCGTGGCTTCGCTGCGCGCCAGTGCGCCGATTCGCATTCATGACTGCGCCAACGTCGCCACCTCGTTCCCCAACTTCCTGGCGCTGTGCGCCGAAGTGGGGATTCGCGTGGCAGAAGAGGGCAAGTCGTGAATTCAATGGCACCGGTTATCACCATCGACGGACCAAGCGGCTCGGGCAAGGGCACGGTCGCCGGGCTGATTGCCCGCGAGCTGGGCTGGAAGCTGCTGGACTCCGGCGCGCTGTATCGCTTGCTGGC  >  NC_002947/1978415‑1978704

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.