New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2129966 =	54 (1.050)	5 (0.100)	5/244	NT	10.1%	coding (2233/2496 nt)	fimD	type I pili subunit FimD
	?	NC_002947	2130009 =	38 (0.780)					coding (2190/2496 nt)	fimD	type I pili subunit FimD

GCTCCTGGCTGGGGTTGGTGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAA  >  NC_002947/2129819‑2130106                                                                                                                                                     |                                                                                                                                             gCTCCTGGCTGGGGTTGGTGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGt                                                                                                                                             >  3:49665/1‑149 (MQ=255)     ctggctggGGTTGGTGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGcc                                                                                                                                          <  1:300447/148‑1 (MQ=255)     ctggctggGGTTGGTGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCt                                                                                                                                         >  7:156781/1‑149 (MQ=255)        gctggGGTTGGTGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCg                                                                                                                                       <  4:49665/148‑1 (MQ=255)        caaaacgcaacgggtacgcgcaccaattcacgcggttatgcacttttgccctacctgcaaccgtaccggaccaattcggtggtcctggaaaccgaccgtctcgatcctgatgtggaaatcgacaacggcatcgcccaggtaGTGCCTCg                                                                                                                                       <  3:188319‑M1/8‑1 (MQ=255)             ggTTGGTGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCgg                                                                                                                                 <  1:56766/149‑1 (MQ=255)                aacgggtacgcgcaccaattcacgcggttatgcacttttgccctacctgcaaccgtaccggaccaattcggtggtcctggaaaccgaccgtctcgatcctgatgtggaaatcgacaacggcatcgcccaggtaGTGCCTCGAAGCGGTg                                                                                                                               <  3:259596‑M1/16‑1 (MQ=255)                 ggTGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGc                                                                                                                              <  2:17482/148‑1 (MQ=255)                  gTGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCtt                                                                                                                            >  6:288769/1‑149 (MQ=255)                     aGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGAc                                                                                                                         >  8:295898/1‑149 (MQ=255)                           aCCAGGCCCGCCTGCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCa                                                                                                                       <  1:52692/145‑1 (MQ=255)                           aCCAGGCCCGCCTGCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCa                                                                                                                       >  2:52692/1‑145 (MQ=255)                             cAGGCCCGCCTGCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCtt                                                                                                                            >  7:80217/1‑138 (MQ=255)                             cAGGCCCGCCTGCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCtt                                                                                                                            <  8:80217/138‑1 (MQ=255)                              aGGCCCGCCTGCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCAcc                                                                                                                <  1:254997/149‑1 (MQ=255)                              aGGCCCGCCTGCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCAGCGTGCCTCGAAGCGGTGCTTGACCACTGCAcc                                                                                                                <  5:325254/149‑1 (MQ=255)                                  ccGCCTGCCCGACCATGCCCAGTTGGGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAACCGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTg                                                                                                             >  1:3192/1‑149 (MQ=255)                                       gcggttatgcacttttgccctacctgcaaccgtaccggaccaattcggtggtcctggaaaccgaccgtctcgatcctgatgtggaaatcgacaacggcatcgcccaggtaGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAg                                                                                                        >  5:239514‑M1/111‑149 (MQ=255)                                        gCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAgg                                                                                                       >  3:32556/1‑148 (MQ=255)                                         ggttatgcacttttgccctacctgcaaccgtaccggaccaattcggtggtcctggaaaccgaccgtctcgatcctgatgtggaaatcgacaacggcatcgcccaggtaGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGc                                                                                                      >  4:259596‑M1/109‑149 (MQ=255)                                           cGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAGCGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCAc                                                                                                    >  7:171697/1‑148 (MQ=255)                                             aCCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTAc                                                                                                 <  7:295898/149‑1 (MQ=255)                                             aCCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTAc                                                                                                 <  5:135994/149‑1 (MQ=255)                                              ccATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTAcc                                                                                                >  6:99774/1‑149 (MQ=255)                                                aTGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGc                                                                                                      >  7:261217/1‑141 (MQ=255)                                                aTGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGc                                                                                                      <  8:261217/141‑1 (MQ=255)                                                   cccAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGc                                                                                           <  2:50759/149‑1 (MQ=255)                                                           tacctgcaaccgtaccggaccaattcggtggtcctggaaaccgaccgtctcgatcctgatgtggaaatcgacaacggcatcgcccaggtaGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTg                                                                                              <  2:145221‑M1/49‑1 (MQ=255)                                                           tacctgcaaccgtaccggaccaattcggtggtcctggaaaccgaccgtctcgatcctgatgtggaaatcgacaacggcatcgcccaggtaGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTg                                                                                              >  1:145221‑M1/91‑139 (MQ=255)                                                             gTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGtt                                                                                  >  3:34095/1‑149 (MQ=255)                                                             gTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGtt                                                                                  <  4:32556/149‑1 (MQ=255)                                                              tACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTg                                                                                 >  2:104949/1‑149 (MQ=255)                                                                ccGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTc                                                                               <  4:34095/149‑1 (MQ=255)                                                                 cGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTc                                                                               >  5:334733/1‑148 (MQ=255)                                                                        ggCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTc                                                                         <  6:334733/147‑1 (MQ=255)                                                                        ggCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCca                                                                       >  8:17111/1‑149 (MQ=255)                                                                          ccAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCGGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCcaca                                                                     >  1:250906/1‑149 (MQ=255)                                                                              cACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAg                                                                 >  1:100046/1‑149 (MQ=255)                                                                              cACCTGCGCCGCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTCCCTGGGCGATGCCGTTGTCGATTTCCACATCAg                                                                 >  7:304223/1‑149 (MQ=255)                                                                                  tGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGaa                                                                                                                                     >  3:43240/1‑77 (MQ=255)                                                                                  tGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGaa                                                                                                                                     <  4:43240/77‑1 (MQ=255)                                                                                   gggCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATc                                                             >  4:46976/1‑148 (MQ=255)                                                                                    ggCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATc                                                             <  1:104949/147‑1 (MQ=255)                                                                                       cccAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGAGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGAc                                                        >  4:292867/1‑149 (MQ=255)                                                                                           aaGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGAcggtc                                                    <  2:100046/149‑1 (MQ=255)                                                                                                 aGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTTTc                                              >  2:296619/1‑149 (MQ=255)                                                                                                   cGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTTTCCa                                            <  7:17111/149‑1 (MQ=255)                                                                                                           ccTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGAcggt                                                     <  2:118149/132‑1 (MQ=255)                                                                                                           ccTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGAcggt                                                     >  1:118149/1‑132 (MQ=255)                                                                                                           ccTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTTTCCAGGaccacc                                    >  4:105602/1‑149 (MQ=255)                                                                                                             tGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCg                                   >  7:216714/1‑148 (MQ=255)                                                                                                                 tATCGTGAAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTg                              >  1:150180/1‑149 (MQ=255)                                                                                                                     gTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTcc                          <  1:296619/149‑1 (MQ=255)                                                                                                                     gTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTcc                          <  5:99774/149‑1 (MQ=255)                                                                                                                     gTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTcc                          <  3:105602/149‑1 (MQ=255)                                                                                                                     gTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTc                           <  3:46976/148‑1 (MQ=255)                                                                                                                      tGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCg                         >  4:188319/1‑149 (MQ=255)                                                                                                                      cccAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTCTCCAGGACCACCGAATTGGTCCg                         <  8:111730/147‑1 (MQ=255)                                                                                                                            gTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGTCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACgg                   <  2:3192/149‑1 (MQ=255)                                                                                                                               aGTACAAGGCGTCAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGTCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGtt                 <  8:156781/148‑1 (MQ=255)                                                                                                                                      ggCGTGAAACGCGGAGTGACTCTAAGCGGTGCTTGACCACTGCACCCTGGCGATTCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAg         <  8:171697/149‑1 (MQ=255)                                                                                                                                             aaCGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCaaaa  <  5:288769/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                             GCTCCTGGCTGGGGTTGGTGAGCATTACCAGGCCCGCCTGCCCGACCATGCCCAGTT‑GGGTACCGTTCTCGGCCAGCACCTGGGCCCCAAAGGGCAGCGGTTGACCCTGGGTATCGTGCAGGGTCAGTACAAGGCGTGAAACGCGGCGTGCCTCGAAGCGGTGCTTGACCACTGCACCCTGGCGAGGCACTACCTGGGCGATGCCGTTGTCGATTTCCACATCAGGATCGAGACGGTCGGTTTCCAGGACCACCGAATTGGTCCGGTACGGTTGCAGGTAGGGCAAAA  >  NC_002947/2129819‑2130106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.