New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 2987610NA (NA)4 (0.080) 4/246 NT NA coding (789/2991 nt) PP_2612 membrane protein
?NC_002947 = 2987639 NA (NA)coding (760/2991 nt) PP_2612 membrane protein

AGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACAGAC  >  NC_002947/2987504‑2987652
                                                                                                          |                                          
ggtggcgGCTCTGCGGGCGGAGCTGTTGGGCATCCTGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCCGGCTTCAGGTCACGCCGTTGATGCTGGTAGGCCGagacagac  <  8:216633/145‑1 (MQ=1)
                                                                                                          |                                          
AGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACAGAC  >  NC_002947/2987504‑2987652

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.