New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2987610 | NA (NA) | 4 (0.080) | 4/246 | NT | NA | coding (789/2991 nt) | PP_2612 | membrane protein |
? | NC_002947 | = 2987639 | NA (NA) | coding (760/2991 nt) | PP_2612 | membrane protein |
AGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACAGAC > NC_002947/2987504‑2987652 | ggtggcgGCTCTGCGGGCGGAGCTGTTGGGCATCCTGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCCGGCTTCAGGTCACGCCGTTGATGCTGGTAGGCCGagacagac < 8:216633/145‑1 (MQ=1) | AGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCAGGTTTTGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACAGAC > NC_002947/2987504‑2987652 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |