New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3457526	27 (0.520)	3 (0.060)	3/248	NT	8.1%	coding (1165/1392 nt)	bhbP	D‑beta‑hydroxybutyrate permease
	?	NC_002947	= 3457565	42 (0.850)					coding (1126/1392 nt)	bhbP	D‑beta‑hydroxybutyrate permease

CTTGTAGGCCTCGCGGTGGGTGAGGCCGGTCACCGCCAGCAAGGTGATCACCGCGCCATTGTGCGGCAGGGTGTCCATGCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTCGTTCACCAAGGGGTTGGGGATGCTGCGCAGGGCATCGGCCAGCACCAGAAAACC  >  NC_002947/3457380‑3457673                                                                                                                                                   |                                                                                                                                                    cTTGTAGGCCTCGCGGTGGGTGAGGCCGGTCACCGCCAGCAAGGTGATCACCGCGCGATTGTGCGGCAGGGTGTCCATGCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCat                                                                                                                                                   >  6:141987‑M1/1‑147 (MQ=255) cTTGTAGGCCTCGCGGTGGGTGAGGCCGGTCACCGCCAGCAAGGTGATCACCGCGCCATTGTGCGGCAGGGTGTCCATGCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGa                                                                                                                                                   >  3:235062/1‑149 (MQ=255)    gTAGGCCTCGCGGTGGGTGAGGCCGGTCACCGCCAGCAAGGTGATCACCGCGCCATTGTGCGGCAGGGTGTCCATGCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGAt                                                                                                                                                  <  8:22487/147‑1 (MQ=255)    gTAGGCCTCGCGGTGGGTGAGGCCGGTCACCGCCAGCAAGGTGATCACCGCGCCATTGTGCGGCAGGGTGTCCATGCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATg                                                                                                                                                 >  2:272427/1‑148 (MQ=255)                     tgAGGCCGGTCACCGCCAGCAAGGTGATCACCGCGCCATTGTGCGGCAGGGTGTCCATGCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCt                                                                                                                               >  3:311689/1‑149 (MQ=255)                                  cGCCAGCAAGGTGATCACCGCGCCATTGTGCGGCAGGGTGTCCATGCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGc                                                                                                                  >  7:286918/1‑149 (MQ=255)                                         aaGGTGATCACCGCGCCATTGTGCGGCAGGGTGTCCATGCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCatgagcatcgccttggcagccatgggcgacacgttcatcgcc                                                                                                           >  1:43321‑M1/1‑107 (MQ=255)                                               aTCACCGCGCCATTGTGCGGCAGGGTGTCCATGCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCatgagcatcgccttggcagccatgggcgacacgttcatcgccgccgcc                                                                                                     <  5:141987‑M1/149‑49 (MQ=255)                                               aTCACCGCGCCATTGTGCGGCAGGGTGTCCATGCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCatgagcatcgccttggcagccatgggcgacacgttcatcgccgccgc                                                                                                      <  2:43321‑M1/148‑48 (MQ=255)                                                   ccGCGCCATTGTGCGGCAGGGTGTCCATGCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCg                                                                                                 <  8:203964/149‑1 (MQ=255)                                                              tgCGGCAGGGTGTCCATGCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGAt                                                                                      <  6:69105/149‑1 (MQ=255)                                                               gCGGCAGGGTGTCCATGCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATg                                                                                     >  3:20919/1‑149 (MQ=255)                                                                            cATGCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAgg                                                                        >  3:121064/1‑149 (MQ=255)                                                                             aagCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGccc                                                                                                       <  2:130178/115‑1 (MQ=255)                                                                             aTGCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGccc                                                                                                       >  1:130178/1‑117 (MQ=255)                                                                                         gCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATg                                                                                                             <  5:140671‑M2/99‑2 (MQ=255)                                                                                         gCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATg                                                                                                             >  6:140671‑M2/1‑98 (MQ=255)                                                                                            aTGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTc                                                        >  5:260064/1‑149 (MQ=255)                                                                                                 ggcTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTCGTTCa                                                   <  4:235062/149‑1 (MQ=255)                                                                                                 ggcTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTCGTTCa                                                   <  4:20919/149‑1 (MQ=255)                                                                                                     aCCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTCGTTCAcc                                                 >  2:322930/1‑147 (MQ=255)                                                                                                      cccGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGTTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTCGTTCACCAAg                                              <  1:272427/149‑1 (MQ=255)                                                                                                      cccGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTCGTTCACCaa                                               <  7:176065/148‑1 (MQ=255)                                                                                                               gCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGGTGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTCGTTCACCAAGGGGTTggg                                      <  2:135612/148‑1 (MQ=255)                                                                                                                   ttCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAg                                                                                                                         >  2:47537/1‑61 (MQ=255)                                                                                                                        gCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGc                                                           <  3:98526/118‑1 (MQ=255)                                                                                                                        gCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGc                                                           >  4:98526/1‑118 (MQ=255)                                                                                                                           ggATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTCGTTCACCAAGGGGTTGGGGATGCTGCGCAgg                         <  4:307870/149‑1 (MQ=255)                                                                                                                            gATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTCGTTCACCAAGGGGTTGGGGATGCTGCGCAggg                        <  3:238904/149‑1 (MQ=255)                                                                                                                                tCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTCGTTCACCAAGGGGTTGGGGATGCTGCGCAGGGCATc                    >  1:312101/1‑149 (MQ=255)                                                                                                                                 cGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTCGTTCACCAAGGGGTTGGGGATGCTGCGCAGGGCATCg                   >  3:159947/1‑149 (MQ=255)                                                                                                                                   gCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACg                                                                   <  5:289932/99‑1 (MQ=255)                                                                                                                                   gCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACg                                                                   >  6:289932/1‑99 (MQ=255)                                                                                                                                   gCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTCGTTCACCAAGGGGTTGGGGATGCTGCGCAGGGCATCGGc                 >  5:32996/1‑149 (MQ=255)                                                                                                                                     cgcgTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTCGTTCACCAAGGGGTTGGGGATGCTGCGCAGGGCATCGGCCa               <  4:121064/149‑1 (MQ=255)                                                                                                                                           ggcggcggcGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATgccgccgcccacgcggccgatatcccgctggaagtgctacaccgggtagccgccatggccagcggtggcatggacaccctgccgcacaatggcgcggtgat         <  5:141987‑M2/149‑102 (MQ=255)                                                                                                                                            gcggcggcgATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATgccgccgcccacgcggccgatatcccgctggaagtgctacaccgggtagccgccatggccagcggtggcatggacaccctgccgcacaatggcgcggtgat         <  2:43321‑M2/148‑102 (MQ=255)                                                                                                                                              ggcggcgATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTCGTTCACCAAGGGGTTGGGGATGCTGCGCAGGGCATCGGCCAGCACCAGaa      <  4:159947/149‑1 (MQ=255)                                                                                                                                                 ggcgATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATgccgccgcccacgcggccgatatcccgctggaagtgctacaccgggtagccgccatggccagcggtggcatggacaccctgccgcacaatggcgcggtgatcacctt   >  1:43321‑M2/1‑42 (MQ=255)                                                                                                                                                  gcgATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTCGTTCACCAAGGGGTTGGGGATGCTGCGCAGGGCATCGGCCAGCACCAGAAAAcc  >  6:248611/1‑149 (MQ=255)                                                                                                                                                   catgagcatcgccttggcagccatgggcgacacgttcatcgccgccgcccacgcggccgatatcccgctggaagtgctacaccgggtagccgccatggc                                                   >  6:140671‑M1/1‑1 (MQ=255)                                                                                                                                                   catgagcatcgccttggcagccatgggcgacacgttcatcgccgccgcccacgcggccgatatcccgctggaagtgctacaccgggtagccgccatggc                                                   <  5:140671‑M1/99‑99 (MQ=255)                                                                                                                                                   |                                                                                                                                                    CTTGTAGGCCTCGCGGTGGGTGAGGCCGGTCACCGCCAGCAAGGTGATCACCGCGCCATTGTGCGGCAGGGTGTCCATGCCACCGCTGGCCATGGCGGCTACCCGGTGTAGCACTTCCAGCGGGATATCGGCCGCGTGGGCGGCGGCGATGAACGTGTCGCCCATGGCTGCCAAGGCGATGCTCATGCCGCCCGAAGCGGAGCCGGTGATGCCGGCCAGCAAGGTCACGGTGATGGCTTCGTTCACCAAGGGGTTGGGGATGCTGCGCAGGGCATCGGCCAGCACCAGAAAACC  >  NC_002947/3457380‑3457673

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.