New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3934402	59 (1.140)	4 (0.080)	3/248	NT	6.3%	coding (1011/1911 nt)	PP_3467	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 3934434	63 (1.280)					coding (979/1911 nt)	PP_3467	sigma‑54 dependent transcriptional regulator

CGGCACGCGGGCTGGCCTGGTGCAAGGCCCGAGCGACCACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCA  >  NC_002947/3934257‑3934548                                                                                                                                                  |                                                                                                                                                    cGGCACGCGGGCTGGCCTGGTGCAAGGCCCGAGCGACCACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCaga                                                                                                                                                  <  2:46183/149‑1 (MQ=255)     aCGCGGGCTGGCCTGGTGCAAGGCCCGAGCGACCACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCAt                                                                                                                                              >  4:101657/1‑149 (MQ=255)        cgGGCTGGCCTGGTGCAAGGCCCGAGCGACCACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGa                                                                                                                                           <  4:164317/149‑1 (MQ=255)                ccTGGTGCAAGGCCCGAGCGACCACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGc                                                                                                                                   <  3:120815/149‑1 (MQ=255)                ccTGGTGCAAGGCCCGAGCGACCACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGc                                                                                                                                   <  3:16190/149‑1 (MQ=255)                    gTGCAAGGCCCGAGCGACCACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGa                                                                                                                                 <  5:327836/147‑1 (MQ=255)                         aGGCCCGAGCGACCACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTg                                                                                                                          <  1:190696/149‑1 (MQ=255)                          ggCCCGAGCGACCACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGc                                                                                                                         >  2:82335/1‑149 (MQ=255)                             ccGAGCGACCACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTc                                                                                                                       >  7:263820/1‑148 (MQ=255)                                   gACCACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCGAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAAggccg                                                                                                                >  4:249942‑M2/1‑144 (MQ=255)                                     ccACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCttgagcaaacagtcgcctgcactcgatgctctggccgga                                                                                                              <  1:257553‑M1/149‑40 (MQ=255)                                     ccACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGc                                                                                                             >  6:82428/1‑149 (MQ=255)                                      cACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCttgagcaaacagtcgcctgcactcgatgctctggccggag                                                                                                             <  5:72287‑M1/149‑41 (MQ=255)                                                ccGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATg                                                                                                   <  2:67161/148‑1 (MQ=255)                                                 cGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGgt                                                                                                 <  2:39733/149‑1 (MQ=255)                                                     aCCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGa                                                                                                                                           <  1:115272/104‑1 (MQ=255)                                                     aCCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGa                                                                                                                                           >  2:115272/1‑104 (MQ=255)                                                     aCCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGc                                                                                             >  2:119127/1‑149 (MQ=255)                                                      ccGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCttgagcaaacagtcgcctgcactcgatgctctggccggag                                                                                                             <  1:326093‑M1/133‑41 (MQ=255)                                                      ccGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCttgagcaaacagtcgcctgcactcgatgctctggccggag                                                                                                             >  2:326093‑M1/1‑93 (MQ=255)                                                        ggTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTgg                                                                                          <  7:190265/149‑1 (MQ=255)                                                          tttCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTgggg                                                                                        <  5:32367/149‑1 (MQ=255)                                                          gttCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGGAGGTGGCGCGCCAGGCGTTGATCACCTCCGGCCAGACCATCGAGTGCAGGCGACTGTTGGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTgggg                                                                                        <  6:270927/148‑1 (MQ=255)                                                            tCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTggggg                                                                                       <  8:263820/148‑1 (MQ=255)                                                               cccAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACt                                                                                                                               <  8:206099/106‑1 (MQ=255)                                                               cccAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACt                                                                                                                               >  7:206099/1‑106 (MQ=255)                                                                ccAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGGGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTAcc                                                                                  >  1:300851/1‑149 (MQ=255)                                                                ccAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGCCTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTAcc                                                                                  >  8:55929/1‑149 (MQ=255)                                                                  agcagcagcACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCg                                                                                >  4:41565/1‑149 (MQ=255)                                                                      gcagcaCTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCa                                                                            >  2:15719/1‑149 (MQ=255)                                                                       cagcaCTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCAt                                                                           >  1:311994/1‑149 (MQ=255)                                                                            cTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGgcgc                                                                      <  6:300955/149‑1 (MQ=255)                                                                            cTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGgcgc                                                                      <  3:101657/149‑1 (MQ=255)                                                                               gCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGGTCAA‑GGCCGGCTGGCTGGATGGTGTGCTGGGGTTTACCGGGCCGTGGggcg                                                                     >  8:123449/1‑147 (MQ=255)                                                                               gCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCgg                                                                    <  1:324724/148‑1 (MQ=255)                                                                               gCAAACCATTGCCCAGCCCCTGGCGAGCCATCCGCAGGTTGCGCGCCACGGCTTGCTCACCACCGGCCAGAGCATCGAGTCCAGGCGACTCTTTGCTCAA‑GGCCGGCTTGCTGCATGGTGTGCTCGGGGTTACCAGGCCATGGCGCgg                                                                    >  5:322667/1‑148 (MQ=255)                                                                                  aaCCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCaa                                                                                                                     >  1:197518/1‑97 (MQ=255)                                                                                  aaCCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCaa                                                                                                                     <  2:197518/97‑1 (MQ=255)                                                                                  aaCCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAACGGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAg                                                                 <  1:82335/149‑1 (MQ=255)                                                                                      aTTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTTCTGGGGGTTACCCGGCCATGGCGCGGCAGCTg                                                              >  8:153092/1‑147 (MQ=255)                                                                                          cccAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGgcgc                                                                      >  1:208763/1‑135 (MQ=255)                                                                                          cccAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGgcgc                                                                      <  2:208763/135‑1 (MQ=255)                                                                                          cccAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAggg                                                         >  5:295892/1‑148 (MQ=255)                                                                                           ccAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCa                                                       >  4:23535/1‑149 (MQ=255)                                                                                           ccAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCa                                                       >  2:313168/1‑149 (MQ=255)                                                                                            cAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCAc                                                      <  3:41565/149‑1 (MQ=255)                                                                                             aGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGc                                                                   >  8:167740/1‑135 (MQ=255)                                                                                             aGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGc                                                                   <  7:167740/135‑1 (MQ=255)                                                                                             aGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACg                                                     >  8:44186/1‑149 (MQ=255)                                                                                                  cTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTgg                                                                                          <  7:246794/107‑1 (MQ=255)                                                                                                  cTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTgg                                                                                          >  8:246794/1‑107 (MQ=255)                                                                                                  cTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGaaa                                                 >  3:293906/1‑148 (MQ=255)                                                                                                   tGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTgg                                                                                          >  5:135855/1‑106 (MQ=255)                                                                                                   tGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTgg                                                                                          <  6:135855/106‑1 (MQ=255)                                                                                                     gCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGTGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATa                                               <  5:228131/147‑1 (MQ=255)                                                                                                         gCCAGGGGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACt                                          <  2:78151/148‑1 (MQ=255)                                                                                                                         gcgcCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTg                          >  2:140737/1‑148 (MQ=255)                                                                                                                         gcgcCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGc                         <  1:119127/149‑1 (MQ=255)                                                                                                                          cgcCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCa                        <  3:23535/149‑1 (MQ=255)                                                                                                                           gcCAGGCGTTGATCACATCCGGCCAGAGCATCGAGTGCAGGCGACAGTTTCCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCAGGGAAATAGAACTCGCCCTTGGCGGTCTGCAc                       >  1:57112/1‑149 (MQ=255)                                                                                                                                gCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACgctgc                  <  2:300851/149‑1 (MQ=255)                                                                                                                                   ttGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGa               <  5:82428/149‑1 (MQ=255)                                                                                                                                     gATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGAc              <  6:295892/148‑1 (MQ=255)                                                                                                                                           cTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAAggccggaggtgatcaacgcctggcgcgcaacctgcgcatggctcgccaggggctgggcaatggtttgccagtgctgctgctgggcgaaaccggtaccggcaaggaagtg        <  5:72287‑M2/149‑110 (MQ=255)                                                                                                                                           cTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAAggccggaggtgatcaacgcctggcgcgcaacctgcgcatggctcgccaggggctgggcaatggtttgccagtgctgctgctgggcgaaaccgg                        <  1:326093‑M2/133‑94 (MQ=255)                                                                                                                                           cTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAAggccggaggtgatcaacgcctggcgcgcaacctgcgcatggctcgccaggggctgggcaatggtttgccagtgctgctgctgggcgaaaccgg                        >  2:326093‑M2/1‑40 (MQ=255)                                                                                                                                           cTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGccc       >  6:88848/1‑149 (MQ=255)                                                                                                                                            tCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAAggccggaggtgatcaacgcctggcgcgcaacctgcgcatggctcgccaggggctgggcaatggtttgccagtgctgctgctgggcgaaaccggtaccggcaaggaagtgg       <  1:257553‑M2/149‑111 (MQ=255)                                                                                                                                            tCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCt      >  8:81189/1‑149 (MQ=255)                                                                                                                                              cGGCCttgagcaaacagtcgcctgcactcgatgctctggccggaggtgatcaacgcctcgcgcgcaacctgcgcatggctcgccaggggctgggcaatggtttgccagtgctgctgctgggcgaaaccggtaccggcaaggaagtggtc     >  4:249942‑M1/1‑5 (MQ=255)                                                                                                                                              cGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACgctgct                 <  5:19919/136‑1 (MQ=255)                                                                                                                                              cGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACgctgct                 >  6:19919/1‑136 (MQ=255)                                                                                                                                              cGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCt      <  1:15719/147‑1 (MQ=255)                                                                                                                                                 ccAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCca  >  7:238734/1‑148 (MQ=255)                                                                                                                                                  cAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCca  >  2:269806/1‑147 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CGGCACGCGGGCTGGCCTGGTGCAAGGCCCGAGCGACCACTTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAGCACTGGCAAACCATTGCCCAGCCCCTGGCGAGCCATGCGCAGGTTGCGCGCCAGGCGTTGATCACCTCCGGCCAGAGCATCGAGTGCAGGCGACTGTTTGCTCAA‑GGCCGGCTTGCTGGATGGTGTGCTGGGGGTTACCCGGCCATGGCGCGGCAGCTGTAGGGCACGGAAATAGAACTCGCCCTTGGCGGTCTGCACGCTGCTGACCCCGCCCTGCCA  >  NC_002947/3934257‑3934548

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.